RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 NMRK1Q9NWW6 199 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 GRHL1Q9NZI5 618 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 CPSF2Q9P2I0 782 aaKnown RBP8.71□□□□□ -1.02
CCM2-210ENST00000478169 HEY2Q9UBP5 337 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 ADAM21Q9UKJ8 722 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 TMCO1Q9UM00 188 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 ZNF175Q9Y473 711 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 ZNF780BQ9Y6R6 833 aa8.71□□□□□ -1.02
CCM2-210ENST00000478169 CR1P17927 2039 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 A0A096LPK6 155 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 HMX2A2RU54 273 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 STX16-NPEPL1H3BU86 382 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 STX16O14662 325 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 CRLF1O75462 422 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 CT45A8P0DMV1 189 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 CT45A9P0DMV2 189 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 PPP3CBP16298 524 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 PCSK2P16519 638 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 IL12BP29460 328 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 TYK2P29597 1187 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 MAGEA4P43358 317 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 CLDN15P56746 228 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 SIRPAP78324 504 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 MRPS35P82673 323 aaKnown RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 CAV1Q03135 178 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 DUSP2Q05923 314 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 GALNT1Q10472 559 aaPredicted RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 TRAF3Q13114 568 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 GANABQ14697 944 aaKnown RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 LTB4RQ15722 352 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 CT45A2Q5DJT8 189 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 ZNF628Q5EBL2 1059 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 BEX5Q5H9J7 111 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 TECRLQ5HYJ1 363 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 OR5M10Q6IEU7 315 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 SH2D5Q6ZV89 423 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 LARP4Q71RC2 724 aaKnown RBP eCLIP8.7□□□□□ -1.029e-6■■■■■ 29.6
CCM2-210ENST00000478169 ZNF550Q7Z398 422 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 MILR1Q7Z6M3 343 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 UBQLNLQ8IYU4 475 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 SAMD14Q8IZD0 417 aaPredicted RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 PTGR2Q8N8N7 351 aaPredicted RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 ZNF610Q8N9Z0 462 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 OR4K17Q8NGC6 315 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 TMEM171Q8WVE6 324 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 FIG4Q92562 907 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 CNRIP1Q96F85 164 aaPredicted RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 ZC3HAV1LQ96H79 300 aaKnown RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 VSTM2LQ96N03 204 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 NAPGQ99747 312 aaPredicted RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 CXorf56Q9H5V9 222 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 RNF122Q9H9V4 155 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 ZNF701Q9NV72 531 aaPredicted RBP8.7□□□□□ -1.02
CCM2-210ENST00000478169 PPP4R1LQ9P1A2 415 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 PCTPQ9UKL6 214 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 UTS2RQ9UKP6 389 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 PROCRQ9UNN8 238 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 SLC12A4Q9UP95 1085 aa8.7□□□□□ -1.02
CCM2-210ENST00000478169 FREM1Q5H8C1 2179 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 B4DXG7 233 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 RBP1P09455 135 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 FCGR2AP12318 317 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 HK1P19367 917 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 TCEA1P23193 301 aaKnown RBP8.69□□□□□ -1.02
CCM2-210ENST00000478169 ALDH9A1P49189 494 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 SERPINB8P50452 374 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 SUCLG1P53597 346 aaKnown RBP8.69□□□□□ -1.02
CCM2-210ENST00000478169 NR1H2P55055 460 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 CORO7P57737 925 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 GNG11P61952 73 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 MRPS25P82663 173 aaKnown RBP8.69□□□□□ -1.02
CCM2-210ENST00000478169 GUCY2DQ02846 1103 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 GUSBP1Q15486 140 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 ERCC6LQ2NKX8 1250 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 SGO1Q5FBB7 561 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 FAM214BQ7L5A3 538 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 CCDC116Q8IYX3 515 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 FADS6Q8N9I5 356 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 OR4F6Q8NGB9 312 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 FNDC9Q8TBE3 224 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 SELENOMQ8WWX9 145 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 PHF21BQ96EK2 531 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 PIGQQ9BRB3 760 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 PINK1Q9BXM7 581 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 STMN4Q9H169 189 aaPredicted RBP8.69□□□□□ -1.02
CCM2-210ENST00000478169 DSN1Q9H410 356 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 ZBTB26Q9HCK0 441 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 SDHAF3Q9NRP4 125 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 PLSCR4Q9NRQ2 329 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 SNX6Q9UNH7 406 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 ZNF337Q9Y3M9 751 aa8.69□□□□□ -1.02
CCM2-210ENST00000478169 CADP27708 2225 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.68□□□□□ -1.02
CCM2-210ENST00000478169 KLF4O43474 513 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 RAD51CO43502 376 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 PLOD3O60568 738 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 SMIM24O75264 130 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 SOX30O94993 753 aa8.68□□□□□ -1.02
CCM2-210ENST00000478169 ESRRBO95718 433 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms