RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TBC1D3FA6NER0 549 aaPredicted RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3LB9A6J9 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 LDB3O75112 727 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CSN2P05814 226 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 PROS1P07225 676 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3HP0C7X1 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CEBPBP17676 345 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 RPL4P36578 427 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 PSMB10P40306 273 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 KIR2DL3P43628 341 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 ZNF81P51508 661 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CXCR4P61073 352 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 FABP5Q01469 135 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 DEFB110Q30KQ9 67 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 FAM46CQ5VWP2 391 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3GQ6DHY5 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3CQ6IPX1 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3Q8IZP1 549 aaPredicted RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 PGBD3Q8N328 593 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 ANKK1Q8NFD2 765 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 OR52I1Q8NGK6 324 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TM9SF4Q92544 642 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TRIM43Q96BQ3 446 aaPredicted RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 OTUB2Q96DC9 234 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 BTBD2Q9BX70 525 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 MED28Q9H204 178 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 ENAMQ9NRM1 1142 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 GPR55Q9Y2T6 319 aaPredicted RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 PPIL1Q9Y3C6 166 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 A0A1W2PP55 124 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 DAPL1A0PJW8 107 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 LRRN3E7EW58 273 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 UGDHO60701 494 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 LALBAP00709 142 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 YES1P07947 543 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CSF3P09919 207 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 FBXO45P0C2W1 286 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CHRNB1P11230 501 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 HOXB6P17509 224 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 NT5EP21589 574 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 DDX6P26196 483 aaKnown RBP eCLIP9.19□□□□□ -0.94
CMC1-209ENST00000477739 SHC1P29353 583 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 IRS1P35568 1242 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 RPS27P42677 84 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 PRLHRP49683 370 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CCR6P51684 374 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 RPA4Q13156 261 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 FBXO43Q4G163 708 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 NOXA1Q86UR1 476 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 OR8J1Q8NGP2 316 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 OR6F1Q8NGZ6 308 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 CHTF18Q8WVB6 975 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 SIPA1Q96FS4 1042 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 PPP1R16AQ96I34 528 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TEFMQ96QE5 360 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 MCHR1Q99705 422 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 SLC25A18Q9H1K4 315 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 LRRN3Q9H3W5 708 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 C11orf49Q9H6J7 331 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 RC3H2Q9HBD1 1191 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 P2RX2Q9UBL9 471 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 SEC14L4Q9UDX3 406 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 HEPACAM2A8MVW5 462 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 H0YIV9 168 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 PI15O43692 258 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 FGF19O95750 216 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 IL1RNP18510 177 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 AK4P27144 223 aaPredicted RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 XCR1P46094 333 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 VSX2P58304 361 aaPredicted RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 PGBD2Q6P3X8 592 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 DPPA4Q7L190 304 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 LINC00471Q8N535 108 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 FAM98AQ8NCA5 519 aaKnown RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 TMEM255BQ8WV15 326 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 CRELD1Q96HD1 420 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 TXNDC15Q96J42 360 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 CNDP2Q96KP4 475 aaKnown RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 RNF121Q9H920 327 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 SPATA6Q9NWH7 488 aaPredicted RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 ING3Q9NXR8 418 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 KLHL28Q9NXS3 571 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 TNFRSF10DQ9UBN6 386 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 FBXL4Q9UKA2 621 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 MAPRE3Q9UPY8 281 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 FRMPD3Q5JV73 1810 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 CIB4A0PJX0 185 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 RNASET2O00584 256 aaKnown RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 HCN1O60741 890 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 LILRB3O75022 631 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 RAB36O95755 333 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 PVRP15151 417 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 BMP7P18075 431 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 ATF4P18848 351 aaPredicted RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 PTX3P26022 381 aaPredicted RBP9.18□□□□□ -0.94
CMC1-209ENST00000477739 MMP12P39900 470 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 RAB15P59190 212 aa9.18□□□□□ -0.94
CMC1-209ENST00000477739 SQSTM1Q13501 440 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms