RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	GAB1	Q13480	694 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZNHIT3	Q15649	155 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ATP6AP1L	Q52LC2	224 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	EIPR1	Q53HC9	387 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZNF385B	Q569K4	471 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	NHSL2	Q5HYW2	709 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	C6orf136	Q5SQH8	315 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	C1orf185	Q5T7R7	199 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	VASN	Q6EMK4	673 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	LRIG3	Q6UXM1	1119 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	WDSUB1	Q8N9V3	476 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	OR10Q1	Q8NGQ4	319 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZFP28	Q8NHY6	868 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	EFHD2	Q96C19	240 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	PGM2	Q96G03	612 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	PKNOX2	Q96KN3	472 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	C3orf30	Q96M34	536 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZIM3	Q96PE6	472 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	TIMP4	Q99727	224 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	GIMAP2	Q9UG22	337 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	MAPRE3	Q9UPY8	281 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	ACTL7B	Q9Y614	415 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	NCKAP5	O14513	1909 aa		11.17	□□□□□ -0.62
PTPN7-210	ENST00000477625	EXPH5	Q8NEV8	1989 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	TTC36	A6NLP5	189 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	AHRR	A9YTQ3	701 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	ITM2A	O43736	263 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	HSPA4L	O95757	839 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	DHRS4L1	P0CG22	281 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	PRPS2	P11908	318 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	PRF1	P14222	555 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	DDX5	P17844	614 aa	Known RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	GPC1	P35052	558 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	FRK	P42685	505 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	CRYZ	Q08257	329 aa	Known RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	MPP2	Q14168	576 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	CHI3L2	Q15782	390 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	DECR1	Q16698	335 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	CES4A	Q5XG92	561 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	YRDC	Q86U90	279 aa	Known RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	PLCZ1	Q86YW0	608 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	CCDC71	Q8IV32	467 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	MCEMP1	Q8IX19	187 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	PM20D2	Q8IYS1	436 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	ULK2	Q8IYT8	1036 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	CEP70	Q8NHQ1	597 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	RNF138	Q8WVD3	245 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZBTB9	Q96C00	473 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	SPOCK3	Q9BQ16	436 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	LMF2	Q9BU23	707 aa	Known RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	UCK2	Q9BZX2	261 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625		Q9N2J8	555 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	KCNK9	Q9NPC2	374 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	SERHL	Q9NQF3	203 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	NTM	Q9P121	344 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	ATP6V1H	Q9UI12	483 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	MRTO4	Q9UKD2	239 aa	Known RBP	11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	CBLC	Q9ULV8	474 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	SLC6A5	Q9Y345	797 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625	WIF1	Q9Y5W5	379 aa		11.16	□□□□□ -0.62
PTPN7-210	ENST00000477625		A0A0G2JNJ9	132 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	FAM47E-STBD1	D6RA91	191 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	SKAP2	O75563	359 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	LYPLA1	O75608	230 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	SNUPN	O95149	360 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZWINT	O95229	277 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	ACTL6A	O96019	429 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	SNRPB2	P08579	225 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	MYZAP	P0CAP1	466 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	CYP4B1	P13584	511 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	BMP7	P18075	431 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	GRK2	P25098	689 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	GABRA3	P34903	492 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	HPCAL1	P37235	193 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	RPL3	P39023	403 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	PSMD4	P55036	377 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	ABCE1	P61221	599 aa	Known RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	MLC1	Q15049	377 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	IL23R	Q5VWK5	629 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	FNDC5	Q8NAU1	212 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	HOXB13	Q92826	284 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	ABTB1	Q969K4	478 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	TUBGCP3	Q96CW5	907 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	UGT2B28	Q9BY64	529 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	PRDM14	Q9GZV8	571 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	ENKD1	Q9H0I2	346 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	C3orf14	Q9HBI5	128 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	KCNJ16	Q9NPI9	418 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625		Q9UFV3	132 aa		11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN7-210	ENST00000477625	PHF3	Q92576	2039 aa	Known RBP	11.14	□□□□□ -0.63
PTPN7-210	ENST00000477625	FREM3	P0C091	2139 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms