RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ELP4Q96EB1 424 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PGM2Q96G03 612 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 GNRHR2Q96P88 292 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 NODALQ96S42 347 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 ADOQ96SZ5 270 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 UBQLN3Q9H347 655 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PTGES2Q9H7Z7 377 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 NEUROD4Q9HD90 331 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 TNFRSF12AQ9NP84 129 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 DKKL1Q9UK85 242 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 ABCG2Q9UNQ0 655 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 RNF6Q9Y252 685 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.34□□□□□ -0.91
CCM2-208ENST00000476594 WIF1Q9Y5W5 379 aa9.34□□□□□ -0.91
CCM2-208ENST00000476594 NCOA6Q14686 2063 aaPredicted RBP9.34□□□□□ -0.91
CCM2-208ENST00000476594 HSPB2A8KAH6 182 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 UPK1AO00322 258 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 DVL2O14641 736 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 SCAMP2O15127 329 aaKnown RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 ZNHIT1O43257 154 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 EMC8O43402 210 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 TSPAN2O60636 221 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 IL2RAP01589 272 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 BCKDHAP12694 445 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 PRPS1L1P21108 318 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 TACR1P25103 407 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 PTPN6P29350 595 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 LCN1P31025 176 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 SRD5A2P31213 254 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 PRIM2P49643 509 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 CORO7P57737 925 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 NUP107P57740 925 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 ABCE1P61221 599 aaKnown RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 PDE7AQ13946 482 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 GANABQ14697 944 aaKnown RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 MLC1Q15049 377 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 CHI3L2Q15782 390 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 HSPB2Q16082 182 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 SLC25A35Q3KQZ1 300 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 LSM12Q3MHD2 195 aaKnown RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 XKR7Q5GH72 579 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 NHSL2Q5HYW2 709 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 EMC4Q5J8M3 183 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 RIPPLY2Q5TAB7 128 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 HHATQ5VTY9 493 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 FAM219BQ5XKK7 198 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 BICRALQ6AI39 1079 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 ZCCHC12Q6PEW1 402 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 BHLHB9Q6PI77 547 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 EXOC3L1Q86VI1 746 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 IFNEQ86WN2 208 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 LACC1Q8IV20 430 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 TRIM42Q8IWZ5 723 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 ULK2Q8IYT8 1036 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 FAM83FQ8NEG4 500 aaPredicted RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 NUP43Q8NFH3 380 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 OR6Y1Q8NGX8 325 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 OR2T11Q8NH01 316 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 LILRB4Q8NHJ6 448 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 ABTB1Q969K4 478 aaPredicted RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 MOAP1Q96BY2 351 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 EFHD2Q96C19 240 aaPredicted RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 PKNOX2Q96KN3 472 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 EGLN2Q96KS0 407 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 MS4A4EQ96PG1 132 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 SPOCK3Q9BQ16 436 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 TTYH2Q9BSA4 534 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 LMF2Q9BU23 707 aaKnown RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 TUBB1Q9H4B7 451 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 NOP53Q9NZM5 478 aaKnown RBP9.33□□□□□ -0.92
CCM2-208ENST00000476594 PPP4R1LQ9P1A2 415 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 SPRR3Q9UBC9 169 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 STOML1Q9UBI4 398 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 CAMK2AQ9UQM7 478 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 RAP2CQ9Y3L5 183 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 PTGDR2Q9Y5Y4 395 aa9.33□□□□□ -0.92
CCM2-208ENST00000476594 NBPF19A0A087WUL8 3843 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 EML6Q6ZMW3 1958 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 NINQ8N4C6 2090 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 A0A1W2PRB8 838 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 WDR91A4D1P6 747 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 TMEM233B4DJY2 109 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 LINC01387J3KSC0 135 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 PSMG1O95456 288 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 IL33O95760 270 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 CYP4B1P13584 511 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 HPGDP15428 266 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 SSTR2P30874 369 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 EVI2BP34910 448 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 FRKP42685 505 aaPredicted RBP9.32□□□□□ -0.92
CCM2-208ENST00000476594 RFX3P48380 749 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 PRKAG1P54619 331 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 DSCR4P56555 118 aaPredicted RBP9.32□□□□□ -0.92
CCM2-208ENST00000476594 PSG6Q00889 435 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 CRYZQ08257 329 aaKnown RBP9.32□□□□□ -0.92
CCM2-208ENST00000476594 TP53BP2Q13625 1128 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 UGT3A2Q3SY77 523 aa9.32□□□□□ -0.92
CCM2-208ENST00000476594 SPDYE7PQ495Y7 208 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms