RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 LIMS1P48059 325 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 SLC11A1P49279 550 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 PPT1P50897 306 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 CEBPGP53567 150 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 PRPS1P60891 318 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 LSM6P62312 80 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 VLDLRP98155 873 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 IL5RAQ01344 420 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 TLE2Q04725 743 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 MAP4K2Q12851 820 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 DUSP8Q13202 625 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 PTPRCAPQ14761 206 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 RSU1Q15404 277 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 NPY5RQ15761 445 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 SLC35G1Q2M3R5 365 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 PYDC2Q56P42 97 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ARMC12Q5T9G4 340 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 N4BP2L1Q5TBK1 243 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 WSCD1Q658N2 575 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 KIAA1161Q6NSJ0 714 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 DNAJC24Q6P3W2 148 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 UBE2R2Q712K3 238 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 LINGO2Q7L985 606 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 LRRC28Q86X40 367 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 FUNDC1Q8IVP5 155 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 C10orf107Q8IVU9 208 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 DNAAF1Q8NEP3 725 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 GPRC5AQ8NFJ5 357 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 OR4C15Q8NGM1 316 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 OR5M9Q8NGP3 310 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 OR4K15Q8NH41 348 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ADAMTS15Q8TE58 950 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 TMEM40Q8WWA1 233 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 XAGE5Q8WWM1 108 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 OR1E3Q8WZA6 343 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 MR1Q95460 341 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 NSUN4Q96CB9 384 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 SPACA9Q96E40 222 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 MVB12AQ96EY5 273 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 OTUB1Q96FW1 271 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 CMTM7Q96FZ5 175 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 NUDT11Q96G61 164 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 NECAB3Q96P71 396 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 MS4A4EQ96PG1 132 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ELF4Q99607 663 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 SLC30A3Q99726 388 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 CPNE1Q99829 537 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 MGME1Q9BQP7 344 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 WDR83Q9BRX9 315 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 MSTO1Q9BUK6 570 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ALG8Q9BVK2 526 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 AMBRA1Q9C0C7 1298 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 CHST5Q9GZS9 411 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 WDR55Q9H6Y2 383 aaPredicted RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 C14orf93Q9H972 538 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 FBRSL1Q9HCM7 1045 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 DLL4Q9NR61 685 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 TMPRSS4Q9NRS4 437 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 GAR1Q9NY12 217 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 ZDHHC2Q9UIJ5 367 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 TUBD1Q9UJT1 453 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 C3orf18Q9UK00 162 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 EMCNQ9ULC0 261 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 CARHSP1Q9Y2V2 147 aaKnown RBP3.92□□□□□ -1.78
CD55-208ENST00000476590 CDH10Q9Y6N8 788 aa3.92□□□□□ -1.78
CD55-208ENST00000476590 ROBO3Q96MS0 1386 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 BCORQ6W2J9 1755 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 KIDINS220Q9ULH0 1771 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 IQCMA0A1B0GVH7 501 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 A0A1W2PPE3 182 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 TCRBV5S2A0A599 114 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 TMEM218A2RU14 115 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 C22orf46C9J442 243 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 H3BML4 177 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 PDXKO00764 312 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 TP53I11O14683 189 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 BCKDKO14874 412 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 ARPC2O15144 300 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 SUV39H1O43463 412 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 TRIM13O60858 407 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 FAM20BO75063 409 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 GGCTO75223 188 aaKnown RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 RPP40O75818 363 aaKnown RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 RGS11O94810 467 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 STBD1O95210 358 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 ADAP00813 363 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 LRG1P02750 347 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 RPLP1P05386 114 aaKnown RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 HOXB5P09067 269 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 SNRPCP09234 159 aaKnown RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 HNRNPA1P09651 372 aaKnown RBP eCLIP3.91□□□□□ -1.78
CD55-208ENST00000476590 HOXD8P13378 290 aaPredicted RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 ACPPP15309 386 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 TATP17735 454 aaPredicted RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 BMP7P18075 431 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 LAG3P18627 525 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 HOXA5P20719 270 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 EFNA1P20827 205 aaPredicted RBP3.91□□□□□ -1.78
CD55-208ENST00000476590 PRKCHP24723 683 aa3.91□□□□□ -1.78
CD55-208ENST00000476590 PSMB6P28072 239 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms