RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZBTB11O95625 1053 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 TSPAN12O95859 305 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 BMP15O95972 392 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 NGFRP08138 427 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ALOX5P09917 674 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ERVK-10P10266 1014 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 CDK4P11802 303 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 GCFC2P16383 781 aaKnown RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 CYP2B6P20813 491 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 GIFP27352 417 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 BMI1P35226 326 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 FEN1P39748 380 aaKnown RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ID1P41134 155 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 EPS15P42566 896 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 FHITP49789 147 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 RGS8P57771 180 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 DSCR9P59020 149 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 LINC00205P59089 165 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 EWSR1Q01844 656 aaKnown RBP eCLIP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 GPR17Q13304 367 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 STK11Q15831 433 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 GGTA1PQ4G0N0 100 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 RFTN2Q52LD8 501 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 HSP90B2PQ58FF3 399 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 PIP5KL1Q5T9C9 394 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 RAET1LQ5VY80 246 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 AWAT2Q6E213 333 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 KIAA1161Q6NSJ0 714 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 PNCKQ6P2M8 343 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 NET1Q7Z628 596 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 LUZP2Q86TE4 346 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 GPR137CQ8N3F9 429 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 MAB21L3Q8N8X9 362 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 Q8N9G6 341 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 PNPLA2Q96AD5 504 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 KIAA1143Q96AT1 154 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 LRRC39Q96DD0 335 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 C11orf24Q96F05 449 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF479Q96JC4 524 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ANKRD27Q96NW4 1050 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 AGAP3Q96P47 875 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 TECTBQ96PL2 329 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ALG9Q9H6U8 611 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 TMEM185BQ9H7F4 350 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 IL1RL2Q9HB29 575 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 SMOXQ9NWM0 555 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 MRPL22Q9NWU5 206 aaKnown RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 KLHL28Q9NXS3 571 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ERRFI1Q9UJM3 462 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 PACSIN2Q9UNF0 486 aaPredicted RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 RNF6Q9Y252 685 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 MRPL11Q9Y3B7 192 aaKnown RBP3.68□□□□□ -1.82
VPS13D-207ENST00000476169 SELENOKQ9Y6D0 94 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 COMMD3-BMI1R4GMX3 469 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 WDR97A6NE52 1622 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 DISP1Q96F81 1524 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 ATP10DQ9P241 1426 aa3.68□□□□□ -1.82
VPS13D-207ENST00000476169 TNIKQ9UKE5 1360 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SMCO3A2RU48 225 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 LMO7DNF2Z398 122 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 EI24O14681 340 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 AKR7A2O43488 359 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 TRIM3O75382 744 aaPredicted RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 STX11O75558 287 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SORBS2O94875 1100 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 FGF19O95750 216 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 PGK1P00558 417 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 IGHV4-39P01824 125 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 IGKV2-30P06310 120 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 CCDC172P0C7W6 258 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 FGF5P12034 268 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 POU2F1P14859 743 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 ACADSP16219 412 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 RPL35AP18077 110 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 CHMLP26374 656 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 CASP14P31944 242 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 HPCAL1P37235 193 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 BRCC3P46736 316 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 RPL27P61353 136 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 ACY1Q03154 408 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 ASPHQ12797 758 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 ZP4Q12836 540 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 MERTKQ12866 999 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 BNIP1Q12981 228 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF74Q16587 644 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 FAM106AQ4KMX7 169 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 XKR7Q5GH72 579 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SPANXN4Q5MJ08 99 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 CELF3Q5SZQ8 465 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SLX4IPQ5VYV7 408 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 Q6ZVQ6 151 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 NLRP9Q7RTR0 991 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 EGFL6Q8IUX8 553 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 KIRREL3Q8IZU9 778 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SPEM1Q8N4L4 309 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 CLDN19Q8N6F1 224 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 BBS1Q8NFJ9 593 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms