RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 OR51B5Q9H339 312 aa17.51■□□□□ 0.39
ECHDC1-214ENST00000474289 SERHL2Q9H4I8 314 aa17.51■□□□□ 0.39
ECHDC1-214ENST00000474289 TAAR2Q9P1P5 351 aa17.51■□□□□ 0.39
ECHDC1-214ENST00000474289 PTGFRNQ9P2B2 879 aa17.51■□□□□ 0.39
ECHDC1-214ENST00000474289 SPATA2Q9UM82 520 aa17.51■□□□□ 0.39
ECHDC1-214ENST00000474289 OR51B4Q9Y5P0 310 aa17.51■□□□□ 0.39
ECHDC1-214ENST00000474289 KRBOX1C9JBD0 128 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 NFATC1O95644 943 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 SLC16A8O95907 504 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 ATP1B2P14415 290 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 AKR1A1P14550 325 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 RPL3P39023 403 aaKnown RBP17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 CSKP41240 450 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 RIPPLY1Q0D2K3 151 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 RGS7BPQ6MZT1 257 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 C3P1Q6ZMU1 363 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 TEX47Q8TBZ9 253 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 WFDC5Q8TCV5 224 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 FNDC11Q9BVV2 318 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 SPRTNQ9H040 489 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 BAIAP2Q9UQB8 552 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 SLC38A8A6NNN8 435 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 TBL1XO60907 577 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 RGS9O75916 674 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 KLK1P06870 262 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 IL3P08700 152 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 BLVRAP53004 296 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 RAG2P55895 527 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 OR10A3P58181 314 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 ZSWIM7Q19AV6 140 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 CLVS2Q5SYC1 327 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 RPLP0P6Q8NHW5 317 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 TMEM168Q9H0V1 697 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 OR6C2Q9NZP2 312 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 GLS2Q9UI32 602 aa17.5■□□□□ 0.39
ECHDC1-214ENST00000474289 TMEM202A6NGA9 273 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 A8MXK9 166 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 LGALS8O00214 317 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SGTAO43765 313 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 DUSP11O75319 330 aaKnown RBP17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 UBXN7O94888 489 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 UGT2B7P16662 529 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 IMPA1P29218 277 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 EPHA4P54764 986 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 PTSQ03393 145 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 TCTE1Q5JU00 501 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 CLEC12AQ5QGZ9 265 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 KIAA1161Q6NSJ0 714 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SLCO4C1Q6ZQN7 724 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 RASSF6Q6ZTQ3 369 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 BTN2A1Q7KYR7 527 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 MRGPREQ86SM8 312 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 LRRC56Q8IYG6 542 aaPredicted RBP17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 PLD4Q96BZ4 506 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 KCTD12Q96CX2 325 aaKnown RBP17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 NEURL3Q96EH8 262 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 BTBD1Q9H0C5 482 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 CTPS2Q9NRF8 586 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 ATPIF1Q9UII2 106 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 ZNF175Q9Y473 711 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 PLXND1Q9Y4D7 1925 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 RNF13O43567 381 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 FZD7O75084 574 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 MT-ND4P03905 459 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 NMBP08949 121 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 ANKRD34CP0C6C1 535 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 NAT2P11245 290 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 DRD5P21918 477 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 GALP22466 123 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SHC1P29353 583 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 DGCR2P98153 550 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 MAP4K2Q12851 820 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 GRIN2CQ14957 1233 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 HECTD3Q5T447 861 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 FAM27D1Q5T7N8 215 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SFXN4Q6P4A7 337 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SMARCD3Q6STE5 483 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SEZ6L2Q6UXD5 910 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 ZNF783Q6ZMS7 281 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 IKBIPQ70UQ0 350 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 HS6ST3Q8IZP7 471 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 STPG2Q8N412 459 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 C7orf57Q8NEG2 295 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 OR52N1Q8NH53 320 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 ST8SIA2Q92186 375 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 DPYSL5Q9BPU6 564 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 MIEF1Q9NQG6 463 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 MED9Q9NWA0 146 aa17.49■□□□□ 0.39
ECHDC1-214ENST00000474289 SLC28A2O43868 658 aa17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 SOCS5O75159 536 aa17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 POU3F2P20265 443 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 ZNF322Q6U7Q0 402 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 MOSPD2Q8NHP6 518 aa17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 TRMT10AQ8TBZ6 339 aaKnown RBP17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 ZNF416Q9BWM5 594 aa17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 ISG20L2Q9H9L3 353 aaKnown RBP17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 SLAMF7Q9NQ25 335 aa17.48■□□□□ 0.39
ECHDC1-214ENST00000474289 DMRT3Q9NQL9 472 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms