RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 KLRF1Q9NZS2 232 aa12.83□□□□□ -0.36
COMMD3-208ENST00000470045 KIAA1549Q9HCM3 1950 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 PDPK1O15530 556 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 TOXO94900 526 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 TUBBP07437 444 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 BCKDHAP12694 445 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 IL12BP29460 328 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 ASMTP46597 345 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 GAS1P54826 345 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 GALNTL6Q49A17 601 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 RIPPLY2Q5TAB7 128 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 CES4AQ5XG92 561 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 ANKRD26P1Q6NSI1 321 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 SEM1Q6ZVN7 128 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 LARP4Q71RC2 724 aaKnown RBP eCLIP12.82□□□□□ -0.36
COMMD3-208ENST00000470045 ZNF551Q7Z340 670 aaPredicted RBP12.82□□□□□ -0.36
COMMD3-208ENST00000470045 EXOC3L1Q86VI1 746 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 FAM83FQ8NEG4 500 aaPredicted RBP12.82□□□□□ -0.36
COMMD3-208ENST00000470045 OR4N2Q8NGD1 307 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 GFM2Q969S9 779 aaKnown RBP12.82□□□□□ -0.36
COMMD3-208ENST00000470045 PPCDCQ96CD2 204 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 ADOQ96SZ5 270 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 TIMP4Q99727 224 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 LMF2Q9BU23 707 aaKnown RBP12.82□□□□□ -0.36
COMMD3-208ENST00000470045 OR2B2Q9GZK3 357 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 NTMQ9P121 344 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 ZDHHC2Q9UIJ5 367 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 WIF1Q9Y5W5 379 aa12.82□□□□□ -0.36
COMMD3-208ENST00000470045 A0A0G2JNJ9 132 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 TTC36A6NLP5 189 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 AHRRA9YTQ3 701 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 B4DXG7 233 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 CTIFO43310 598 aaKnown RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 CBR3O75828 277 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 BMP7P18075 431 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 KRT20P35900 424 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ADH7P40394 386 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 MAP3K8P41279 467 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 SERPINB4P48594 390 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 MRPS22P82650 360 aaKnown RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ACSF3Q4G176 576 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 EIPR1Q53HC9 387 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 WIPI1Q5MNZ9 446 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 DCST1Q5T197 706 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 GDF7Q7Z4P5 450 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 PLCZ1Q86YW0 608 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 PM20D2Q8IYS1 436 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ZNF295-AS1Q8N0V1 137 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 CLHC1Q8NHS4 586 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ZFP28Q8NHY6 868 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 AGR3Q8TD06 166 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 CIDECQ96AQ7 238 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ZBED6CLQ96FA7 236 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 C3orf30Q96M34 536 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 UGT2B28Q9BY64 529 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 SERHLQ9NQF3 203 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 NPDC1Q9NQX5 325 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ACSS1Q9NUB1 689 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 Q9UFV3 132 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 GIMAP2Q9UG22 337 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 BAIAP2L1Q9UHR4 511 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 MAPRE3Q9UPY8 281 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 OR10H1Q9Y4A9 318 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
COMMD3-208ENST00000470045 MED12Q93074 2177 aa12.81□□□□□ -0.36
COMMD3-208ENST00000470045 MYO9AB2RTY4 2548 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 NKX2-6A6NCS4 301 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 C2orf72A6NCS6 295 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 FAM90A27PA6NNH2 459 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 TMEM114B3SHH9 223 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 FAM47E-STBD1D6RA91 191 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 TM9SF1O15321 606 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 BIRC5O15392 142 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 AKAP10O43572 662 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 FADS1O60427 444 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 EPPINO95925 133 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 ACTL6AO96019 429 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 SNRPB2P08579 225 aaKnown RBP12.8□□□□□ -0.36
COMMD3-208ENST00000470045 CYP4B1P13584 511 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 MSX1P28360 303 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 MAPK1P28482 360 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 ZFP36L2P47974 494 aaKnown RBP12.8□□□□□ -0.36
COMMD3-208ENST00000470045 HSPB3Q12988 150 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 GAB1Q13480 694 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 C6orf136Q5SQH8 315 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 LRIG3Q6UXM1 1119 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 NUDCD3Q8IVD9 361 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 PGM2Q96G03 612 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 WDYHV1Q96HA8 205 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 PKNOX2Q96KN3 472 aa12.8□□□□□ -0.36
COMMD3-208ENST00000470045 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms