RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PCDHGA5Q9Y5G8 931 aa16.88■□□□□ 0.29
SMC4-211ENST00000469858 FAM86C2PA6NEL3 165 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 PRAMEF2O60811 474 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 STX11O75558 287 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 NKX2-2O95096 273 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 TIAF1O95411 115 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 POLR2IP36954 125 aaKnown RBP16.87■□□□□ 0.29
SMC4-211ENST00000469858 GRK6P43250 576 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 GTF2A1P52655 376 aaPredicted RBP16.87■□□□□ 0.29
SMC4-211ENST00000469858 ZNHIT3Q15649 155 aaPredicted RBP16.87■□□□□ 0.29
SMC4-211ENST00000469858 MICAQ29983 383 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 COLEC12Q5KU26 742 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 TTC23Q5W5X9 447 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 RHBDD2Q6NTF9 364 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 FAHD1Q6P587 224 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 QSOX2Q6ZRP7 698 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 PEX5LQ8IYB4 626 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 PIK3C3Q8NEB9 887 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 OR6T1Q8NGN1 323 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 MUS81Q96NY9 551 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 RIBC2Q9H4K1 309 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 NMNAT1Q9HAN9 279 aaPredicted RBP16.87■□□□□ 0.29
SMC4-211ENST00000469858 FBXO34Q9NWN3 711 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 RARRES3Q9UL19 164 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 DTX4Q9Y2E6 619 aa16.87■□□□□ 0.29
SMC4-211ENST00000469858 LNP1A1A4G5 178 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 C17orf105B2RV13 164 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 D6RAR5 112 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 PCDH17O14917 1159 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 CYP4B1P13584 511 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 PRKAR1BP31321 381 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 LIMS1P48059 325 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 PSG6Q00889 435 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 FGD3Q5JSP0 725 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 SLITRK4Q8IW52 837 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 ZNF619Q8N2I2 560 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 SLC5A8Q8N695 610 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 HOXB13Q92826 284 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 RMND5BQ96G75 393 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 ZNF578Q96N58 590 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 FEVQ99581 238 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 LMF2Q9BU23 707 aaKnown RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 FTSJ1Q9UET6 329 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 ZNF443Q9Y2A4 671 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 CENPVL1A0A0U1RR11 272 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 A8MUA0 341 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 SYT5O00445 386 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 FRS3O43559 492 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 SCRG1O75711 98 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 AK1P00568 194 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 IL7RP16871 459 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 RFX3P48380 749 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 HMGA2P52926 109 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 TPD52P55327 224 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 FUT7Q11130 342 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 BIKQ13323 160 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 PIN1Q13526 163 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 TTC33Q6PID6 262 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 MED25Q71SY5 747 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 ZNF786Q8N393 782 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 OR9Q2Q8NGE9 314 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 VSTM2LQ96N03 204 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 ALPK1Q96QP1 1244 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 OR10A5Q9H207 317 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 ZNF696Q9H7X3 374 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 MKKSQ9NPJ1 570 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 RLIMQ9NVW2 624 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 SIDT1Q9NXL6 827 aaKnown RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 CTSFQ9UBX1 484 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 GPR55Q9Y2T6 319 aaPredicted RBP16.86■□□□□ 0.29
SMC4-211ENST00000469858 IFT52Q9Y366 437 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 CHST2Q9Y4C5 530 aa16.86■□□□□ 0.29
SMC4-211ENST00000469858 IGKV3D-11A0A0A0MRZ8 115 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 NPIPA5A0A0B4J1W7 369 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 TRBV4-1A0A0J9YWV2 114 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 CLDN24A6NM45 220 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 NPIPA7E9PJI5 369 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 NTN3O00634 580 aaPredicted RBP16.85■□□□□ 0.29
SMC4-211ENST00000469858 CCNB2O95067 398 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 LDOC1O95751 146 aaPredicted RBP16.85■□□□□ 0.29
SMC4-211ENST00000469858 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
SMC4-211ENST00000469858 ZNF883P0CG24 379 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 NPIPA8P0DM63 369 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 CDH2P19022 906 aaPredicted RBP16.85■□□□□ 0.29
SMC4-211ENST00000469858 GALNSP34059 522 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 EFNA3P52797 238 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 RHAGQ02094 409 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 PWWP2BQ6NUJ5 590 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 DHRS4L2Q6PKH6 230 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 B3GNT8Q7Z7M8 397 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 CLIP4Q8N3C7 705 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 SLC38A9Q8NBW4 561 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 C16orf52Q8NHV5 167 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 CLIP3Q96DZ5 547 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 OCIAD1Q9NX40 245 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 KLHL28Q9NXS3 571 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 ACAD8Q9UKU7 415 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 A4GNTQ9UNA3 340 aa16.85■□□□□ 0.29
SMC4-211ENST00000469858 ZNF232Q9UNY5 417 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms