RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 PPCSQ9HAB8 311 aa12.9□□□□□ -0.34
CALCA-204ENST00000469608 DDX18Q9NVP1 670 aaKnown RBP12.9□□□□□ -0.34
CALCA-204ENST00000469608 OXSMQ9NWU1 459 aa12.9□□□□□ -0.34
CALCA-204ENST00000469608 TAS2R10Q9NYW0 307 aa12.9□□□□□ -0.34
CALCA-204ENST00000469608 ABCA4P78363 2273 aa12.9□□□□□ -0.35
CALCA-204ENST00000469608 C2CD3Q4AC94 2353 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 MTORP42345 2549 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 TLDC2A0PJX2 215 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 CD8B2A6NJW9 211 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 EEF1E1O43324 174 aaKnown RBP12.89□□□□□ -0.35
CALCA-204ENST00000469608 SEC22BO75396 215 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 CBR3O75828 277 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 UROSP10746 265 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 TACR1P25103 407 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 KIR2DL3P43628 341 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 RFX3P48380 749 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 PCLAFQ15004 111 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 ANKRD26P1Q6NSI1 321 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 ENPP6Q6UWR7 440 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 PLXDC2Q6UX71 529 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 IKBIPQ70UQ0 350 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 OR4K17Q8NGC6 315 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 FAM76AQ8TAV0 307 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 RNASE6Q93091 150 aaKnown RBP12.89□□□□□ -0.35
CALCA-204ENST00000469608 GFM2Q969S9 779 aaKnown RBP12.89□□□□□ -0.35
CALCA-204ENST00000469608 LRRC46Q96FV0 321 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 SFXN2Q96NB2 322 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 TUBA1CQ9BQE3 449 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 GLIPR2Q9H4G4 154 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 CRIM1Q9NZV1 1036 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 MID2Q9UJV3 735 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 RPH3AQ9Y2J0 694 aaPredicted RBP12.89□□□□□ -0.35
CALCA-204ENST00000469608 PCNX3Q9H6A9 2034 aa12.89□□□□□ -0.35
CALCA-204ENST00000469608 A0A087WV62 115 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 MBD3L4A6NDZ8 208 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 MBD3L3A6NE82 208 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 MBD3L5A6NJ08 208 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 TMIGD3P0DMS9 266 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 SRD5A2P31213 254 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 EVI2BP34910 448 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 STARP49675 285 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 DGKQP52824 942 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 PSPHP78330 225 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 MRPS22P82650 360 aaKnown RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 PSG6Q00889 435 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 HSPB3Q12988 150 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 STX5Q13190 355 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 MBD3L2Q8NHZ7 208 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.88□□□□□ -0.35
CALCA-204ENST00000469608 EGLN2Q96KS0 407 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 GPATCH1Q9BRR8 931 aaKnown RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 IQCGQ9H095 443 aaKnown RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 L2HGDHQ9H9P8 463 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 CALHM2Q9HA72 323 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 LRTM1Q9HBL6 345 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 EQTNQ9NQ60 294 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 C1orf109Q9NX04 203 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 DNAJB12Q9NXW2 375 aaKnown RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 FLRT3Q9NZU0 649 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
CALCA-204ENST00000469608 ZNF629Q9UEG4 869 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 C19orf53Q9UNZ5 99 aaPredicted RBP12.88□□□□□ -0.35
CALCA-204ENST00000469608 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 B4DXG7 233 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 UPK1AO00322 258 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 SLC28A1O00337 649 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 SYT5O00445 386 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 AZIN1O14977 448 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 PDPK1O15530 556 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 RGS14O43566 566 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 AKAP10O43572 662 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 SLITRK5O94991 958 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 CPN1P15169 458 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 CTSSP25774 331 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 DPP4P27487 766 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 PNLIPRP2P54317 469 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 GAS1P54826 345 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 RPL38P63173 70 aaKnown RBP12.87□□□□□ -0.35
CALCA-204ENST00000469608 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 ZNHIT3Q15649 155 aaPredicted RBP12.87□□□□□ -0.35
CALCA-204ENST00000469608 FLYWCH1Q4VC44 716 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 AAGABQ6PD74 315 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 ZNF551Q7Z340 670 aaPredicted RBP12.87□□□□□ -0.35
CALCA-204ENST00000469608 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 OR2L13Q8N349 312 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 OR2T11Q8NH01 316 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 CLHC1Q8NHS4 586 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 ZPLD1Q8TCW7 415 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 CIDECQ96AQ7 238 aaPredicted RBP12.87□□□□□ -0.35
CALCA-204ENST00000469608 DTNBP1Q96EV8 351 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 APOPT1Q96IL0 206 aa12.87□□□□□ -0.35
CALCA-204ENST00000469608 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
CALCA-204ENST00000469608 POLDIP3Q9BY77 421 aaKnown RBP12.87□□□□□ -0.35
CALCA-204ENST00000469608 Q9N2J8 555 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms