RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SH2D4BQ5SQS7 431 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 AAGABQ6PD74 315 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 P4HA3Q7Z4N8 544 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 PRIMA1Q86XR5 153 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 P3H2Q8IVL5 708 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF610Q8N9Z0 462 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 OR7G2Q8NG99 324 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 SMPDL3BQ92485 455 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF592Q92610 1267 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 APIPQ96GX9 242 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF845Q96IR2 970 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 Q96MF0 132 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 VSTM2LQ96N03 204 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 ZFP3Q96NJ6 502 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 BTBD9Q96Q07 612 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 PAFAH2Q99487 392 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 PIGMQ9H3S5 423 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 UBTD1Q9HAC8 227 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 FOLH1BQ9HBA9 442 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 VPS29Q9UBQ0 182 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 EIF3LQ9Y262 564 aaKnown RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF337Q9Y3M9 751 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 TESMINQ9Y4I5 508 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 TRIM64A6NGJ6 449 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 TRIM64BA6NI03 449 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 KIAA1324LA8MWY0 1029 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-204ENST00000469207 TRIM49D1C9J1S8 452 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 MSTNO14793 375 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 HCRTR2O43614 444 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 GMFGO60234 142 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 SMPD2O60906 423 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 SUPT7LO94864 414 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 OTCP00480 354 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 HEXAP06865 529 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 IL12BP29460 328 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 PHBP35232 272 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 CLCQ05315 142 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 STX5Q13190 355 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 SHEQ5VZ18 495 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 C16orf78Q8WTQ4 265 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 MDFIQ99750 246 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 MRPL57Q9BQC6 102 aaKnown RBP11.07□□□□□ -0.64
HDAC3-204ENST00000469207 FAIM2Q9BWQ8 316 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 EBPLQ9BY08 206 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 BRF2Q9HAW0 419 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 TMEM216Q9P0N5 145 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
HDAC3-204ENST00000469207 MCM8Q9UJA3 840 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 SNX6Q9UNH7 406 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 TIMM22Q9Y584 194 aa11.07□□□□□ -0.64
HDAC3-204ENST00000469207 ANK3Q12955 4377 aaKnown RBP11.07□□□□□ -0.64
HDAC3-204ENST00000469207 ABCA2Q9BZC7 2435 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 SLC22A20A6NK97 555 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 SEC14L5O43304 696 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PCDH7O60245 1069 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 CGAP01215 116 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 INHBAP08476 426 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 HK1P19367 917 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 CHMP24386 653 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PCSK6P29122 969 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 CCKARP32238 428 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 CD79BP40259 229 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 MC3RP41968 323 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PNLIPRP2P54317 469 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 DSCR4P56555 118 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-204ENST00000469207 CLDN20P56880 219 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 TRA2BP62995 288 aaKnown RBP11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PSG6Q00889 435 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 ACKR1Q16570 336 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 C10orf62Q5T681 223 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-204ENST00000469207 MARCH3Q86UD3 253 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 OR2M3Q8NG83 312 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 OR4K17Q8NGC6 315 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 FNDC9Q8TBE3 224 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 ZNF675Q8TD23 568 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 DCAKDQ8WVC6 231 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 MTBPQ96DY7 904 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PERPQ96FX8 193 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 KCNA7Q96RP8 456 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 MED18Q9BUE0 208 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 C1QTNF3Q9BXJ4 246 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PINK1Q9BXM7 581 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 ACPTQ9BZG2 426 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 MRPL46Q9H2W6 279 aaKnown RBP11.06□□□□□ -0.64
HDAC3-204ENST00000469207 ACBD3Q9H3P7 528 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 PPP4R1LQ9P1A2 415 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 TRPS1Q9UHF7 1281 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 TMCO1Q9UM00 188 aa11.06□□□□□ -0.64
HDAC3-204ENST00000469207 MRPS18CQ9Y3D5 142 aaKnown RBP11.06□□□□□ -0.64
HDAC3-204ENST00000469207 ARID1AO14497 2285 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 GNG14A0A1W2PPG7 69 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 H3BML4 177 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 ARHGEF9O43307 516 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 FADS1O60427 444 aa11.05□□□□□ -0.64
HDAC3-204ENST00000469207 DLX3O60479 287 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms