RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 IGLON5A6NGN9 336 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 KIAA0513O60268 411 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 HCN1O60741 890 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 RPP40O75818 363 aaKnown RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 TSHRP16473 764 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 RHCEP18577 417 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 PRKACGP22612 351 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 RPL34P49207 117 aaKnown RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 MAN2A2P49641 1150 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 RAB10P61026 200 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 C1orf61Q13536 156 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 TAZQ16635 292 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 LIN54Q6MZP7 749 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 LRRTM4Q86VH4 590 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 SLC34A3Q8N130 599 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 L3MBTL4Q8NA19 623 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 OR5T3Q8NGG3 340 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.4□□□□□ -0.91
NUP50-214ENST00000469163 CXorf40AQ8TE69 158 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 OR8D1Q8WZ84 308 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 SLAMF9Q96A28 289 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 MRPL38Q96DV4 380 aaKnown RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 COPS8Q99627 209 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 RBBP8Q99708 897 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 ATG101Q9BSB4 218 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 GATA5Q9BWX5 397 aaPredicted RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 MUC13Q9H3R2 512 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 CAPN10Q9HC96 672 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 DHCR7Q9UBM7 475 aaKnown RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 KCNK6Q9Y257 313 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 MMACHCQ9Y4U1 282 aa9.4□□□□□ -0.91
NUP50-214ENST00000469163 ZNF638Q14966 1978 aaKnown RBP9.4□□□□□ -0.91
NUP50-214ENST00000469163 SLC22A3O75751 556 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ADRB3P13945 408 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 CRATP43155 626 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 RBP2P50120 134 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 GMFBP60983 142 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ISL1P61371 349 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 KCNAB1Q14722 419 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ARL13AQ5H913 290 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 LAIR2Q6ISS4 152 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 GCNT7Q6ZNI0 430 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 Q6ZS52 159 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SLC46A3Q7Z3Q1 461 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 GALNT5Q7Z7M9 940 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 CPEB3Q8NE35 698 aaKnown RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 RPLP0P6Q8NHW5 317 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SCRN2Q96FV2 425 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 NSUN5Q96P11 429 aaKnown RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 HHIPQ96QV1 700 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 NRTNQ99748 197 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 PARD6GQ9BYG4 376 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 IL36AQ9UHA7 158 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 NUP214P35658 2090 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 A0A0G2JN53 185 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 LRIT2A6NDA9 550 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 OR6C68A6NDL8 312 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 K7ESM1 405 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 NR5A2O00482 541 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SLC16A6O15403 523 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 BPNT1O95861 308 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 LAMP2P13473 410 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 LHCGRP22888 699 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 HSPA7P48741 367 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 CTSCP53634 463 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 MAT1AQ00266 395 aaKnown RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 ZNF79Q15937 498 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 FRMPD2BQ6IN97 320 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 TPRG1Q6ZUI0 275 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 RABEPKQ7Z6M1 372 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 MCATQ8IVS2 390 aaKnown RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 SPAG16Q8N0X2 631 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ARRDC1Q8N5I2 433 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 C10orf53Q8N6V4 93 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 GPR26Q8NDV2 337 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 NECAB3Q96P71 396 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 IFT27Q9BW83 186 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SRRQ9GZT4 340 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ZFP64Q9NPA5 681 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 DNAJB11Q9UBS4 358 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 C3orf18Q9UK00 162 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 PCDHB10Q9UN67 800 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 RAP2CQ9Y3L5 183 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ZNF236Q9UL36 1845 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 UBDO15205 165 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SOX15O60248 233 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 MOSPD3O75425 235 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 FGF4P08620 206 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 CSF3P09919 207 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 HIST1H2AGP0C0S8 130 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 ACP5P13686 325 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SPI1P17947 270 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 NPR2P20594 1047 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 HIST1H2ADP20671 130 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 OMPP47874 163 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 GPR143P51810 404 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 MVKQ03426 396 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms