RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 NHLH1Q02575 133 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CHRNEQ04844 493 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 MGAT2Q10469 447 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 DUSP8Q13202 625 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 DSG2Q14126 1118 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 DGCR6Q14129 220 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 KCNAB1Q14722 419 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 EXOSC7Q15024 291 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TRMT12Q53H54 448 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 SNAP47Q5SQN1 464 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 RNF220Q5VTB9 566 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 BROXQ5VW32 411 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TYW3Q6IPR3 259 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TCTN3Q6NUS6 607 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 QSOX2Q6ZRP7 698 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TTLL10Q6ZVT0 673 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TSPYL5Q86VY4 417 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 GATAD2AQ86YP4 633 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 MAML2Q8IZL2 1156 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 SLC5A8Q8N695 610 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TOR1AIP2Q8NFQ8 470 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 OR7G1Q8NGA0 311 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 OR52R1Q8NGF1 315 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 OR52J3Q8NH60 311 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 OR1L3Q8NH93 324 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 GPR151Q8TDV0 419 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 FBLIM1Q8WUP2 373 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 OIT3Q8WWZ8 545 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 HRASLS5Q96KN8 279 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 ALOXE3Q9BYJ1 711 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 SAP130Q9H0E3 1048 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 ADNPQ9H2P0 1102 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 ANKRA2Q9H9E1 313 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 NMNAT1Q9HAN9 279 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 FOLH1BQ9HBA9 442 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CAPN10Q9HC96 672 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 Q9N2J8 555 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CCNB1IP1Q9NPC3 277 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 KRCC1Q9NPI7 259 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 C14orf105Q9NVL8 296 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 PRODH2Q9UF12 536 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 NDRG4Q9ULP0 352 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CFL2Q9Y281 166 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 PCDHGA8Q9Y5G5 932 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 HEMK1Q9Y5R4 338 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 KCNE3Q9Y6H6 103 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 EXPH5Q8NEV8 1989 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 KNL1Q8NG31 2342 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 RALGAPA1Q6GYQ0 2036 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 MYOCOSA0A1B0GUC4 107 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CPED1A4D0V7 1026 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 EME2A4GXA9 379 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 H3BMH7 237 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 M0R3H8 397 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SLC1A7O00341 560 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SIGLEC6O43699 453 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 OR10H3O60404 316 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 MPZL2O60487 215 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 MRPS14O60783 128 aaKnown RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 NME6O75414 186 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 OR5F1O95221 314 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ANGPTL1O95841 491 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 IFNA16P05015 189 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 RPLP0P05388 317 aaKnown RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 TFAP2AP05549 437 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CT62P0C5K7 136 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 LINGO3P0C6S8 592 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SPTBP11277 2137 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 GSTM3P21266 225 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 EEF1B2P24534 225 aaKnown RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 TRHRP34981 398 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 GGT2P36268 569 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 MAP3K8P41279 467 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CLK3P49761 638 aaKnown RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CDC42P60953 191 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CSNK2BP67870 215 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 DAB2P98082 770 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 MAT1AQ00266 395 aaKnown RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 CD47Q08722 323 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ST3GAL3Q11203 375 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 RAPSNQ13702 412 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 TRAM2Q15035 370 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ANGPT1Q15389 498 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 C6orf141Q5SZD1 244 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ARHGAP40Q5TG30 622 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 GUSBP11Q6P575 273 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SLC23A3Q6PIS1 610 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF773Q6PK81 442 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ISLR2Q6UXK2 745 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF836Q6ZNA1 936 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 PLEKHM3Q6ZWE6 761 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 VRK2Q86Y07 508 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 METTL27Q8N6F8 245 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 AQP11Q8NBQ7 271 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 OR4D9Q8NGE8 314 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 OR9Q2Q8NGE9 314 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ATOH1Q92858 354 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-205ENST00000469129 SLC38A4Q969I6 547 aa8.7□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF501Q96CX3 271 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms