RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 FIS1Q9Y3D6 152 aa19.81■□□□□ 0.76
TTC28-204ENST00000468807 MYO1GB0I1T2 1018 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 RSL1D1O76021 490 aaKnown RBP19.8■□□□□ 0.76
TTC28-204ENST00000468807 CTSSP25774 331 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 PSPHP78330 225 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 MRPS22P82650 360 aaKnown RBP19.8■□□□□ 0.76
TTC28-204ENST00000468807 LIPMQ5VYY2 423 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 FAM71E1Q6IPT2 247 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 EIF1ADQ8N9N8 165 aaKnown RBP19.8■□□□□ 0.76
TTC28-204ENST00000468807 C9orf106Q8NAJ2 232 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 DTNBP1Q96EV8 351 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 SFXN2Q96NB2 322 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 TUBA1CQ9BQE3 449 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 GPATCH1Q9BRR8 931 aaKnown RBP19.8■□□□□ 0.76
TTC28-204ENST00000468807 PPCSQ9HAB8 311 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 OXSMQ9NWU1 459 aa19.8■□□□□ 0.76
TTC28-204ENST00000468807 RPH3AQ9Y2J0 694 aaPredicted RBP19.8■□□□□ 0.76
TTC28-204ENST00000468807 AKAP6Q13023 2319 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 MBD3L4A6NDZ8 208 aaPredicted RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 MBD3L3A6NE82 208 aaPredicted RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 MBD3L5A6NJ08 208 aaPredicted RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 SCO2O43819 266 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 SEC22BO75396 215 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 TMIGD3P0DMS9 266 aaPredicted RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 UROSP10746 265 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 GRK2P25098 689 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 SRD5A2P31213 254 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 PEX19P40855 299 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 RFX3P48380 749 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 STARP49675 285 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 PNLIPRP2P54317 469 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 AAGABQ6PD74 315 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 TDRPQ86YL5 185 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 OR4K17Q8NGC6 315 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 MBD3L2Q8NHZ7 208 aaPredicted RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 FAM76AQ8TAV0 307 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 ZPLD1Q8TCW7 415 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 GFM2Q969S9 779 aaKnown RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 POLDIP3Q9BY77 421 aaKnown RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 GLIPR2Q9H4G4 154 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 PTGDR2Q9Y5Y4 395 aa19.79■□□□□ 0.76
TTC28-204ENST00000468807 MAP1AP78559 2803 aaPredicted RBP19.79■□□□□ 0.76
TTC28-204ENST00000468807 TLDC2A0PJX2 215 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 CPN1P15169 458 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 OPRM1P35372 400 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 STX5Q13190 355 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 TESK1Q15569 626 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 FLYWCH1Q4VC44 716 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 POMZP3Q6PJE2 187 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 PLXDC2Q6UX71 529 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 IKBIPQ70UQ0 350 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 C10orf107Q8IVU9 208 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 IQCGQ9H095 443 aaKnown RBP19.78■□□□□ 0.76
TTC28-204ENST00000468807 PPP4R1LQ9P1A2 415 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 MID2Q9UJV3 735 aa19.78■□□□□ 0.76
TTC28-204ENST00000468807 HRNRQ86YZ3 2850 aaPredicted RBP19.77■□□□□ 0.76
TTC28-204ENST00000468807 A0A087WV62 115 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 C17orf51A8MQB3 221 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 UPK1AO00322 258 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 RGS14O43566 566 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 CTAG2O75638 210 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 SLITRK5O94991 958 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 TACR1P25103 407 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 DPP4P27487 766 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 DNAJA1P31689 397 aaKnown RBP19.77■□□□□ 0.76
TTC28-204ENST00000468807 EVI2BP34910 448 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 ART1P52961 327 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 GFRA1P56159 465 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 PSG6Q00889 435 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 ZNHIT3Q15649 155 aaPredicted RBP19.77■□□□□ 0.76
TTC28-204ENST00000468807 FBXW10Q5XX13 1052 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 ANKRD26P1Q6NSI1 321 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.77■□□□□ 0.76
TTC28-204ENST00000468807 EGLN2Q96KS0 407 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 AMDHD1Q96NU7 426 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 CLEC4MQ9H2X3 399 aaPredicted RBP19.77■□□□□ 0.76
TTC28-204ENST00000468807 LRTM1Q9HBL6 345 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 Q9N2J8 555 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 FOXD3Q9UJU5 478 aaPredicted RBP19.77■□□□□ 0.76
TTC28-204ENST00000468807 CBLCQ9ULV8 474 aa19.77■□□□□ 0.76
TTC28-204ENST00000468807 C19orf53Q9UNZ5 99 aaPredicted RBP19.77■□□□□ 0.76
TTC28-204ENST00000468807 MPDZO75970 2070 aa19.77■□□□□ 0.75
TTC28-204ENST00000468807 CLCA1A8K7I4 914 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 SLC28A1O00337 649 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 AZIN1O14977 448 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 GPC1P35052 558 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 FOXF2Q12947 444 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 HSPB3Q12988 150 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 DECR1Q16698 335 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 FBXL19-AS1Q494R0 122 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 ELP4Q96EB1 424 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 EQTNQ9NQ60 294 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 C1orf109Q9NX04 203 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 TAS2R7Q9NYW3 318 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 WBP11Q9Y2W2 641 aaKnown RBP19.76■□□□□ 0.75
TTC28-204ENST00000468807 MED13LQ71F56 2210 aa19.76■□□□□ 0.75
TTC28-204ENST00000468807 TUBAL3A6NHL2 446 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 PLOD2O00469 737 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 CHEK2O96017 543 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 CPA2P48052 419 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms