RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 UCK2Q9BZX2 261 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 CAPN10Q9HC96 672 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 ZNF304Q9HCX3 659 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 STARD5Q9NSY2 213 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 PLCXD1Q9NUJ7 323 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 HCN3Q9P1Z3 774 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 TESQ9UGI8 421 aaKnown RBP9.5□□□□□ -0.89
MSH5-213ENST00000468136 A4GNTQ9UNA3 340 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 ZNF443Q9Y2A4 671 aaPredicted RBP9.5□□□□□ -0.89
MSH5-213ENST00000468136 PCDHGB1Q9Y5G3 927 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 PCDHGA5Q9Y5G8 931 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 PCDHGA10Q9Y5H3 936 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 HEMK1Q9Y5R4 338 aaPredicted RBP9.5□□□□□ -0.89
MSH5-213ENST00000468136 SNX5Q9Y5X3 404 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 SZT2Q5T011 3432 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 EML5Q05BV3 1969 aa9.5□□□□□ -0.89
MSH5-213ENST00000468136 REV3LO60673 3130 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 TMEM221A6NGB7 291 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 FAM227AF5H4B4 570 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 M0R296 226 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 HCRTR1O43613 425 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 OR10H3O60404 316 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 SEC24DO94855 1032 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 ANGPTL1O95841 491 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ONECUT2O95948 504 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 LINGO3P0C6S8 592 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ATP6V1B1P15313 513 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 FBLP22087 321 aaKnown RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 EEF1B2P24534 225 aaKnown RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 ELAVL4P26378 380 aaKnown RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 PIGAP37287 484 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 PDX1P52945 283 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 RGS8P57771 180 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 TAS2R41P59536 307 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 IL1RL1Q01638 556 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.49□□□□□ -0.89
MSH5-213ENST00000468136 AMZ1Q400G9 498 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ZBED5Q49AG3 693 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 CYP27C1Q4G0S4 372 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 FGD3Q5JSP0 725 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 NKAIN2Q5VXU1 208 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 RHBDD2Q6NTF9 364 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 TSSK4Q6SA08 328 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 DEF8Q6ZN54 512 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 RRM2BQ7LG56 351 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 DGLUCYQ7Z3D6 616 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ARHGAP22Q7Z5H3 698 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 BMP8AQ7Z5Y6 402 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 GPR141Q7Z602 305 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 P3H2Q8IVL5 708 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ZNF440Q8IYI8 595 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 MAML2Q8IZL2 1156 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 RNF113BQ8IZP6 322 aaKnown RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 SLC43A2Q8N370 569 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 AQP11Q8NBQ7 271 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 TMEM52Q8NDY8 209 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 PLPP5Q8NEB5 264 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 OR52R1Q8NGF1 315 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ZNF420Q8TAQ5 688 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 GNPDA2Q8TDQ7 276 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 GPR151Q8TDV0 419 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 DAZLQ92904 295 aaKnown RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 ZNF501Q96CX3 271 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 Q96MT0 163 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 SLC46A1Q96NT5 459 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 CCNL2Q96S94 520 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 FUZQ9BT04 418 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 TGIF2Q9GZN2 237 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 SPRTNQ9H040 489 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 ADNPQ9H2P0 1102 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 LRRN3Q9H3W5 708 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 GAREM1Q9H706 876 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 FOLH1BQ9HBA9 442 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 FGF21Q9NSA1 209 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.49□□□□□ -0.89
MSH5-213ENST00000468136 TMEM9Q9P0T7 183 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 NDOR1Q9UHB4 597 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 COMMD3-BMI1R4GMX3 469 aa9.49□□□□□ -0.89
MSH5-213ENST00000468136 A0A1W2PS29 197 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 OR6C76A6NM76 312 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 SLC1A7O00341 560 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 ARHGAP33O14559 1287 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 FFAR1O14842 300 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 PCDH17O14917 1159 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 POLR1CO15160 346 aaPredicted RBP9.48□□□□□ -0.89
MSH5-213ENST00000468136 TNRC18O15417 2968 aaPredicted RBP9.48□□□□□ -0.89
MSH5-213ENST00000468136 DNAJB6O75190 326 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 NME6O75414 186 aaPredicted RBP9.48□□□□□ -0.89
MSH5-213ENST00000468136 CYP7B1O75881 506 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 CLIC3O95833 236 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 CFIP05156 583 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 CKMT1AP12532 417 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 TNNI3P19429 210 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 TNFRSF1BP20333 461 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 S1PR1P21453 382 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 CSF2RBP32927 897 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 GABRA3P34903 492 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 RORAP35398 523 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 SOX18P35713 384 aa9.48□□□□□ -0.89
MSH5-213ENST00000468136 KRT20P35900 424 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms