RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 FAM9CQ8IZT9 166 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 GBP7Q8N8V2 638 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-207ENST00000467819 CDC26Q8NHZ8 85 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 EFHD2Q96C19 240 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-207ENST00000467819 ERP27Q96DN0 273 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 MTBPQ96DY7 904 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 DTNBP1Q96EV8 351 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 PLEKHF2Q9H8W4 249 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 SLC35C2Q9NQQ7 365 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 TIMM22Q9Y584 194 aa19.1■□□□□ 0.65
COL9A3-207ENST00000467819 SH3D21A4FU49 640 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 CTAGE8P0CG41 777 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 ATP5F1P24539 256 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-207ENST00000467819 DPP4P27487 766 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 GCAP28676 217 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 CLDN18P56856 261 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 ZNF155Q12901 538 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-207ENST00000467819 CTAGE4Q8IX94 777 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 OR7G2Q8NG99 324 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 OR4K17Q8NGC6 315 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 OR4N2Q8NGD1 307 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 UCN2Q96RP3 112 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 KCNA7Q96RP8 456 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 ACBD3Q9H3P7 528 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 GSX1Q9H4S2 264 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-207ENST00000467819 OR10H1Q9Y4A9 318 aa19.09■□□□□ 0.65
COL9A3-207ENST00000467819 B4DXG7 233 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 GOLGA8RI6L899 631 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 SCO2O43819 266 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 GOSR1O95249 250 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 HRGP04196 525 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 ZNF708P17019 499 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 IMPDH1P20839 514 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 CPOXP36551 454 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 PNLIPRP2P54317 469 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 DIO3P55073 304 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 SH2D4BQ5SQS7 431 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 TIFABQ6ZNK6 161 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 P4HA3Q7Z4N8 544 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 DACH2Q96NX9 599 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 BBS4Q96RK4 519 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 PIGMQ9H3S5 423 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 DLL4Q9NR61 685 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 TAS2R9Q9NYW1 312 aa19.08■□□□□ 0.64
COL9A3-207ENST00000467819 ZIC3O60481 467 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 PLOD3O60568 738 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 TGM6O95932 706 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 ENO1P06733 434 aaKnown RBP19.07■□□□□ 0.64
COL9A3-207ENST00000467819 ANXA4P09525 319 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-207ENST00000467819 CHMP24386 653 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 MPIP34949 423 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 PRKAA2P54646 552 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 GAS1P54826 345 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 PKNOX1P55347 436 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 LCP2Q13094 533 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 GAB1Q13480 694 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 SPDYAQ5MJ70 313 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 SLC22A9Q8IVM8 553 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 UBQLNLQ8IYU4 475 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 MNS1Q8NEH6 495 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 RNF138Q8WVD3 245 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 PPP4R1LQ9P1A2 415 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 PACSIN3Q9UKS6 424 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 NFU1Q9UMS0 254 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 STK38LQ9Y2H1 464 aa19.07■□□□□ 0.64
COL9A3-207ENST00000467819 MRPS18CQ9Y3D5 142 aaKnown RBP19.07■□□□□ 0.64
COL9A3-207ENST00000467819 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 A0A1W2PNV4 684 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 A0A1W2PPR1 153 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 HCRTR2O43614 444 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 TNFSF13O75888 250 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 JUNP05412 331 aaKnown RBP19.06■□□□□ 0.64
COL9A3-207ENST00000467819 ABHD2P08910 425 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 EVI2BP34910 448 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 B3GALT5-AS1P59052 145 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 PSPHP78330 225 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 MRPS22P82650 360 aaKnown RBP19.06■□□□□ 0.64
COL9A3-207ENST00000467819 C2orf80Q0P641 193 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 GLE1Q53GS7 698 aaKnown RBP19.06■□□□□ 0.64
COL9A3-207ENST00000467819 CHMP1BQ7LBR1 199 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 LCA5Q86VQ0 697 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 WFDC11Q8NEX6 87 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 L3HYPDHQ96EM0 354 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 STMN4Q9H169 189 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-207ENST00000467819 DSN1Q9H410 356 aa19.06■□□□□ 0.64
COL9A3-207ENST00000467819 CCDC151A5D8V7 595 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 A8MXE2 369 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 CASKO14936 926 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 COQ9O75208 318 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 SMNDC1O75940 238 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■■□ 26.7
COL9A3-207ENST00000467819 HOXB4P17483 251 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-207ENST00000467819 DDCP20711 480 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 MC3RP41968 323 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 NCBP2P52298 156 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL9A3-207ENST00000467819 DSCR4P56555 118 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-207ENST00000467819 PSG6Q00889 435 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 ZNF763Q0D2J5 394 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 STX5Q13190 355 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 PRSS53Q2L4Q9 553 aa19.05■□□□□ 0.64
COL9A3-207ENST00000467819 GALNT18Q6P9A2 607 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms