RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 VSTM4Q8IW00 320 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 ZCCHC7Q8N3Z6 543 aaKnown RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 ZNF418Q8TF45 676 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 TMBIM1Q969X1 311 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 RGMAQ96B86 450 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 CMTM7Q96FZ5 175 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 DHRS9Q9BPW9 319 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 CENPKQ9BS16 269 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 TMEM79Q9BSE2 394 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 RBM4Q9BWF3 364 aaKnown RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 BRINP2Q9C0B6 783 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 DSN1Q9H410 356 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 LYARQ9NX58 379 aaKnown RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 ARMCX1Q9P291 453 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 MCTS1Q9ULC4 181 aaKnown RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 FKBP7Q9Y680 259 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 VWFP04275 2813 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 A0A1W2PR48 441 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 E7EQL1 145 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA6L22H0YM25 854 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GOLGA8MH3BSY2 632 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 LINC01387J3KSC0 135 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 PLPP1O14494 284 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 SCO2O43819 266 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 SYNGR4O95473 234 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 BMP4P12644 408 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF23P17027 643 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF37AP17032 561 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GABRB3P28472 473 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 IL12BP29460 328 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 KRT20P35900 424 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 IRF8Q02556 426 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 LGALS3BPQ08380 585 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GANABQ14697 944 aaKnown RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 SLMAPQ14BN4 828 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 EXOSC7Q15024 291 aaKnown RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 PPA1Q15181 289 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 TSNQ15631 228 aaKnown RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 PDK4Q16654 411 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 FBXO48Q5FWF7 155 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 ANKRD22Q5VYY1 191 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 FAM45BPQ6NSW5 357 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 SLC22A25Q6T423 547 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 CYP20A1Q6UW02 462 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 BHLHA15Q7RTS1 189 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 PEG10Q86TG7 708 aaKnown RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 ADAMTSL2Q86TH1 951 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 SYCE1Q8N0S2 351 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GABRG1Q8N1C3 465 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 RNF175Q8N4F7 328 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 OR52B6Q8NGF0 335 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 FAM45AQ8TCE6 357 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 UBE2E3Q969T4 207 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 WDR34Q96EX3 536 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 PDLIM5Q96HC4 596 aaKnown RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GBP4Q96PP9 640 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 ADOQ96SZ5 270 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 CNOT10Q9H9A5 744 aaKnown RBP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 ZBTB26Q9HCK0 441 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 SMYD2Q9NRG4 433 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 GLRX2Q9NS18 164 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 AP4B1Q9Y6B7 739 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
HDAC3-203ENST00000467533 CADP27708 2225 aa9.08□□□□□ -0.96
HDAC3-203ENST00000467533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 TMPRSS11DO60235 418 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 ALX3O95076 343 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 IPO7O95373 1038 aaKnown RBP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 NTN1O95631 604 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 ADAP00813 363 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 AHSGP02765 367 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 FAM58BPP0C7Q3 252 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 MLNP12872 115 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 SERPINB1P30740 379 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 HSPA7P48741 367 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 CHRNB3Q05901 458 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 STX5Q13190 355 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 CHIT1Q13231 466 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 SCGB2A2Q13296 93 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 EFR3AQ14156 821 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 ACAP2Q15057 778 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 TRIP13Q15645 432 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 MED27Q6P2C8 311 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 TFAP2EQ6VUC0 442 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 GGNQ86UU5 652 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 TCAIMQ8N3R3 496 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 CEP112Q8N8E3 955 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 OR2M3Q8NG83 312 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 OR10D3Q8NH80 312 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 SLC35A4Q96G79 324 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 RADILQ96JH8 1075 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 TRMOQ9BU70 441 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF747Q9BV97 191 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 XAB2Q9HCS7 855 aaKnown RBP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 SLC17A6Q9P2U8 582 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms