RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 MEIKINA0A087WXM9 373 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 H7C2Y5 167 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 HBQ1P09105 142 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 CRATP43155 626 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 DCDC1P59894 354 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 CRYZQ08257 329 aaKnown RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 ZNF805Q5CZA5 627 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 MZT2AQ6P582 158 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 C3P1Q6ZMU1 363 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 UXS1Q8NBZ7 420 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 OR4D10Q8NGI6 311 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 IL17FQ96PD4 163 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 SORBS1Q9BX66 1292 aaKnown RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 PITHD1Q9GZP4 211 aaPredicted RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 SLC6A14Q9UN76 642 aa17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 RUVBL1Q9Y265 456 aaKnown RBP17.01■□□□□ 0.31
SNAPC3-205ENST00000467062 PQLC2LA1A4F0 135 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 SCAMP2O15127 329 aaKnown RBP17■□□□□ 0.31
SNAPC3-205ENST00000467062 CATP04040 527 aaKnown RBP17■□□□□ 0.31
SNAPC3-205ENST00000467062 RNLSQ5VYX0 342 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 ASPGQ86U10 573 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 PIAS4Q8N2W9 510 aaPredicted RBP17■□□□□ 0.31
SNAPC3-205ENST00000467062 OR8J2Q8NGG1 315 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 OR52P1PQ8NH57 321 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 NXPE3Q969Y0 559 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 C11orf24Q96F05 449 aaPredicted RBP17■□□□□ 0.31
SNAPC3-205ENST00000467062 PCDHB11Q9Y5F2 797 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 PCYT1BQ9Y5K3 369 aaPredicted RBP17■□□□□ 0.31
SNAPC3-205ENST00000467062 NOTCH4Q99466 2003 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 SLC5A10A0PJK1 596 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 CASC3O15234 703 aaKnown RBP17■□□□□ 0.31
SNAPC3-205ENST00000467062 TIMP1P01033 207 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 HRGP04196 525 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 FGF2P09038 288 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 ETFAP13804 333 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 LCN1P31025 176 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 VIPR2P41587 438 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 PRMT2P55345 433 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 TBPL1P62380 186 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 VEZF1Q14119 521 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 OPCMLQ14982 345 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 ARHGAP15Q53QZ3 475 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 KANSL1Q7Z3B3 1105 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 TMEM151BQ8IW70 566 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 FAM46DQ8NEK8 389 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 DLL4Q9NR61 685 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 GPATCH2Q9NW75 528 aa17■□□□□ 0.31
SNAPC3-205ENST00000467062 SMIM30A4D0T7 59 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 PDCD5O14737 125 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 CPEP16870 476 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 IDSP22304 550 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 HBA1P69905 142 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 ZNF77Q15935 545 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 SPDYE7PQ495Y7 208 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 TRMT11Q7Z4G4 463 aaKnown RBP16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 FAM9CQ8IZT9 166 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 FTMTQ8N4E7 242 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 MRPL43Q8N983 215 aaKnown RBP16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 POF1BQ8WVV4 589 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 TMEM203Q969S6 136 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 FZD3Q9NPG1 666 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 POMT2Q9UKY4 750 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 AP1M2Q9Y6Q5 423 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 ZNF106Q9H2Y7 1883 aaKnown RBP16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 TRAV6A0A075B6T7 132 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 MPTX1A8MV57 137 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 H0YIV9 168 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 LGALS8O00214 317 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 RNGTTO60942 597 aaKnown RBP16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 ENTPD6O75354 484 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 GCM2O75603 506 aaPredicted RBP16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 NPPBP16860 134 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 RGNQ15493 299 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 PABPC1L2AQ5JQF8 200 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 GRHL2Q6ISB3 625 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 STPG2Q8N412 459 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 BVESQ8NE79 360 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 SPPL2AQ8TCT8 520 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 RERGLQ9H628 205 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 MLXQ9UH92 298 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 KCNK7Q9Y2U2 307 aa16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 PCDHGA9Q9Y5G4 932 aaKnown RBP16.99■□□□□ 0.31
SNAPC3-205ENST00000467062 OTOL1A6NHN0 477 aaPredicted RBP16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 ZAR1LA6NP61 321 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 PRRT4C9JH25 899 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 AIPO00170 330 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 CEBPBP17676 345 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 MMP12P39900 470 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 EPHA4P54764 986 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 SPIBQ01892 262 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 SLBPQ14493 270 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 DHCR24Q15392 516 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 SPIN4Q56A73 249 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 MAMSTRQ6ZN01 415 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 SLCO4C1Q6ZQN7 724 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 USP30Q70CQ3 517 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 HSD17B13Q7Z5P4 300 aaPredicted RBP16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 OR4C15Q8NGM1 316 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 C1GALT1C1Q96EU7 318 aa16.98■□□□□ 0.31
SNAPC3-205ENST00000467062 DOHHQ9BU89 302 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms