RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CDC7O00311 574 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 PLOD2O00469 737 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 SMAD9O15198 467 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 PIN1P1O15428 100 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 HCRTR2O43614 444 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 SHOX2O60902 331 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 PSIP1O75475 530 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 SYF2O95926 243 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 CGAP01215 116 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 CLEC2LP0C7M8 214 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 ZNF10P21506 573 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 CCND1P24385 295 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 PPP2R1BP30154 601 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 COILP38432 576 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 NR4A2P43354 598 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 TTPAP49638 278 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 TMED10P49755 219 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 IRX1P78414 480 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 CCZ1BP86790 482 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 CCZ1P86791 482 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 UBXN1Q04323 297 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 STX4Q12846 297 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 EFTUD2Q15029 972 aaKnown RBP eCLIP5.2□□□□□ -1.587e-7■□□□□ 9.7
NCL-208ENST00000466274 PDCD4Q53EL6 469 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 SHQ1Q6PI26 577 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 ZNF571Q7Z3V5 609 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 STRA8Q7Z7C7 330 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 KIAA1328Q86T90 577 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 YRDCQ86U90 279 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 LYSMD2Q8IV50 215 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 PPFIBP2Q8ND30 876 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 CPEB3Q8NE35 698 aaKnown RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 FAM83FQ8NEG4 500 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 OR1J4Q8NGS1 313 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 OR4L1Q8NH43 312 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 NT5CQ8TCD5 201 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 SLC2A12Q8TD20 617 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 LKAAEAR1Q8TD35 194 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 PTPMT1Q8WUK0 201 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 ZNF480Q8WV37 535 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 HSD17B8Q92506 261 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 C3orf49Q96BT1 292 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 TMEM41AQ96HV5 264 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 RADILQ96JH8 1075 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 RILPQ96NA2 401 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 NPLQ9BXD5 320 aaPredicted RBP5.2□□□□□ -1.58
NCL-208ENST00000466274 CBLN4Q9NTU7 201 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 FKBP7Q9Y680 259 aa5.2□□□□□ -1.58
NCL-208ENST00000466274 OR51F1A6NGY5 319 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 H3BMM5 538 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 H7C417 338 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 PFDN6O15212 129 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 OR1F1O43749 312 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 ZBTB14O43829 449 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 LCMT2O60294 686 aaKnown RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 CTNSO60931 367 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 ZNF189O75820 626 aaPredicted RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 TGM6O95932 706 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 GOT2P00505 430 aaKnown RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 LTA4HP09960 611 aaKnown RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 ZNF23P17027 643 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 PSMA3P25788 255 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 FMO4P31512 558 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 SEC24CP53992 1094 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 NRG3P56975 720 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 TAS2R40P59535 323 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 RAB8AP61006 207 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 PRAMEP78395 509 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 TP53BP2Q13625 1128 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 POU6F1Q14863 301 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 KRT31Q15323 416 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 RPS6KA2Q15349 733 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 BCL2A1Q16548 175 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 NTRK2Q16620 822 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 CYP1B1Q16678 543 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 DPCR1Q3MIW9 517 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 VAX1Q5SQQ9 334 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 TIGD3Q6B0B8 471 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 CASC4Q6P4E1 433 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 DRICH1Q6PGQ1 229 aaPredicted RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 STAC2Q6ZMT1 411 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 RINLQ6ZS11 566 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 SLC29A4Q7RTT9 530 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 EXOC3L1Q86VI1 746 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 IFNEQ86WN2 208 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 FBXL14Q8N1E6 418 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 CA13Q8N1Q1 262 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 TRPV3Q8NET8 790 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 UTP15Q8TED0 518 aaKnown RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 LINC00476Q8WZB0 136 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 QKIQ96PU8 341 aaKnown RBP eCLIP5.19□□□□□ -1.58
NCL-208ENST00000466274 SUCNR1Q9BXA5 334 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 ALOXE3Q9BYJ1 711 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 TRIM2Q9C040 744 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 SLITRK2Q9H156 845 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 ACTR8Q9H981 624 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 MYOZ1Q9NP98 299 aaPredicted RBP5.19□□□□□ -1.58
NCL-208ENST00000466274 PLSCR4Q9NRQ2 329 aa5.19□□□□□ -1.58
NCL-208ENST00000466274 DDX56Q9NY93 547 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms