RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 MAP3K8P41279 467 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 MAGEA5P43359 124 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 TMED10P49755 219 aaKnown RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 GYS2P54840 703 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 PPIAP62937 165 aaKnown RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 PRR5P85299 388 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 ZNHIT3Q15649 155 aaPredicted RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 GSTA3Q16772 222 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 CGB2Q6NT52 195 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 FIGNL1Q6PIW4 674 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 GFRALQ6UXV0 394 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 NUP54Q7Z3B4 507 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 DND1Q8IYX4 353 aaKnown RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 TMEM251Q8N6I4 163 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 NATD1Q8N6N6 113 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 ST6GALNAC3Q8NDV1 305 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 OR5D16Q8NGK9 328 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 PSMA8Q8TAA3 256 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 CDS1Q92903 461 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 VPS33AQ96AX1 596 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 RMND5BQ96G75 393 aaPredicted RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 GPR137Q96N19 417 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 RILPQ96NA2 401 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 OR52E6Q96RD3 313 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 ZBTB18Q99592 522 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 DOHHQ9BU89 302 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 CCDC28BQ9BUN5 200 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 SERHL2Q9H4I8 314 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 METTL7AQ9H8H3 244 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 Q9N2J8 555 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 SDR39U1Q9NRG7 319 aaPredicted RBP10.69□□□□□ -0.7
CUX1-207ENST00000465461 GPATCH2Q9NW75 528 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 CNIH4Q9P003 139 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 NTMQ9P121 344 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 MAPRE3Q9UPY8 281 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 OSGIN2Q9Y236 505 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 LIPGQ9Y5X9 500 aa10.69□□□□□ -0.7
CUX1-207ENST00000465461 NCKAP5O14513 1909 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 RNF103-CHMP3A0A140T963 221 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 OR6C70A6NIJ9 312 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 LRRC3CA6NJW4 275 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ASNA1O43681 348 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ICOSLGO75144 302 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 GLSO94925 669 aaPredicted RBP10.68□□□□□ -0.7
CUX1-207ENST00000465461 NKX2-2O95096 273 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 PGRP06401 933 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 IFI6P09912 130 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ALOX5P09917 674 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 KRT20P35900 424 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 PRIM2P49643 509 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 POLR2JP52435 117 aaKnown RBP10.68□□□□□ -0.7
CUX1-207ENST00000465461 MRPS22P82650 360 aaKnown RBP10.68□□□□□ -0.7
CUX1-207ENST00000465461 KCNC4Q03721 635 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 SRSF1Q07955 248 aaKnown RBP eCLIP10.68□□□□□ -0.7
CUX1-207ENST00000465461 ELOAQ14241 798 aaKnown RBP10.68□□□□□ -0.7
CUX1-207ENST00000465461 CYP27C1Q4G0S4 372 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 CMPK2Q5EBM0 449 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ANXA8L1Q5VT79 327 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 FNDC7Q5VTL7 733 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 OR5M10Q6IEU7 315 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 GK5Q6ZS86 529 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 OLIG3Q7RTU3 272 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 C6orf120Q7Z4R8 191 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 FGD2Q7Z6J4 655 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ZAR1Q86SH2 424 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 MIER2Q8N344 545 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 CDRT4Q8N9R6 151 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 HOXB13Q92826 284 aaPredicted RBP10.68□□□□□ -0.7
CUX1-207ENST00000465461 SLC35A4Q96G79 324 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 GNRHR2Q96P88 292 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 TMEM120AQ9BXJ8 343 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ANGPTL4Q9BY76 406 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 RTN4RQ9BZR6 473 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 IL1RL2Q9HB29 575 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 SLC6A13Q9NSD5 602 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 KLRF1Q9NZS2 232 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 TNFRSF10DQ9UBN6 386 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 SH3BGRL2Q9UJC5 107 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 PCDHGB4Q9UN71 923 aa10.68□□□□□ -0.7
CUX1-207ENST00000465461 A0A1B0GTH9 108 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 PRAMEF25A6NGN4 478 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 DYNC1I1O14576 645 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 SCO2O43819 266 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 SEMA7AO75326 666 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 TRIM3O75382 744 aaPredicted RBP10.67□□□□□ -0.7
CUX1-207ENST00000465461 IL33O95760 270 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 NCF2P19878 526 aaPredicted RBP10.67□□□□□ -0.7
CUX1-207ENST00000465461 MATN1P21941 496 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 MASP1P48740 699 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 RNF144AP50876 292 aaPredicted RBP10.67□□□□□ -0.7
CUX1-207ENST00000465461 PNLIPRP2P54317 469 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 DECR1Q16698 335 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 DPY19L1Q2PZI1 675 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 GTDC1Q4AE62 458 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 TIGD2Q4W5G0 525 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 EXOSC6Q5RKV6 272 aaKnown RBP10.67□□□□□ -0.7
CUX1-207ENST00000465461 CDC73Q6P1J9 531 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 ANGPTL8Q6UXH0 198 aa10.67□□□□□ -0.7
CUX1-207ENST00000465461 DNAJC14Q6Y2X3 702 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms