RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ITGA10O75578 1167 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CSTAP01040 98 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PVRP15151 417 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ZNF823P16415 610 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC19A1P41440 591 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ZNF234Q14588 700 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SF3B4Q15427 424 aaKnown RBP eCLIP8.57□□□□□ -1.041e-9■■■■□ 23.3
HPS4-208ENST00000464362 AGAP6Q5VW22 663 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 MSANTD1Q6ZTZ1 278 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ASPGQ86U10 573 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ATCAYQ86WG3 371 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 TMPRSS12Q86WS5 348 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLITRK4Q8IW52 837 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ACOT4Q8N9L9 421 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CASTOR1Q8WTX7 329 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 SPRYD4Q8WW59 207 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 ASB15Q8WXK1 588 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 NSMAFQ92636 917 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CCDC115Q96NT0 180 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 AGAP4Q96P64 663 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 UHRF1Q96T88 793 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 SEC61A2Q9H9S3 476 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PDFQ9HBH1 243 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LYARQ9NX58 379 aaKnown RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 RGS17Q9UGC6 210 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 CA5BQ9Y2D0 317 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CKAP5Q14008 2032 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ZNF879B4DU55 563 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 H7C0S8 307 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 EIF3FO00303 357 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC16A6O15403 523 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 GPX2P18283 190 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CXCR1P25024 350 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 IGFALSP35858 605 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 POU6F2P78424 691 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 CHRNEQ04844 493 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 HES5Q5TA89 166 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLCO4C1Q6ZQN7 724 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 TTLL10Q6ZVT0 673 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC9B2Q86UD5 537 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LRRC25Q8N386 305 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 DNAJC5GQ8N7S2 189 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LINC01599Q8WXQ3 324 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 AKAP1Q92667 903 aaKnown RBP eCLIP8.57□□□□□ -1.04
HPS4-208ENST00000464362 PMM1Q92871 262 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 MMABQ96EY8 250 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 DGAT2Q96PD7 388 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 DPYSL5Q9BPU6 564 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 OR2B2Q9GZK3 357 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 RETREG1Q9H6L5 497 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 RNF121Q9H920 327 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 BRF2Q9HAW0 419 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ATPIF1Q9UII2 106 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC7A7Q9UM01 511 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 VEGFDO43915 354 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ETHE1O95571 254 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SERPINA3P01011 423 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CTSAP10619 480 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PITPNAQ00169 270 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 HTR3DQ70Z44 454 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PEG10Q86TG7 708 aaKnown RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 OR8J2Q8NGG1 315 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 COQ8AQ8NI60 647 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SETD7Q8WTS6 366 aaKnown RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 JSRP1Q96MG2 331 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 SPATA9Q9BWV2 254 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LGR4Q9BXB1 951 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 GRIP1Q9Y3R0 1128 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CDH10Q9Y6N8 788 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 TRIP12Q14669 1992 aaPredicted RBP8.57□□□□□ -1.04
HPS4-208ENST00000464362 C5orf51A6NDU8 294 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 UNC119BA6NIH7 251 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 UGDHO60701 494 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PPP1R3DO95685 299 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LATS1O95835 1130 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC6A6P31641 620 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PSMB10P40306 273 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CEBPGP53567 150 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 MGAT3Q09327 533 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LRRC26Q2I0M4 334 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 INAVAQ3KP66 663 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 HSD17B12Q53GQ0 312 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 KDM4DQ6B0I6 523 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC25A24Q6NUK1 477 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC46A3Q7Z3Q1 461 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PDZD3Q86UT5 571 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 DTD2Q96FN9 168 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 SLC41A3Q96GZ6 507 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 LRIG1Q96JA1 1093 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 OR2M4Q96R27 311 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 MROQ9BYG7 248 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 OR10A4Q9H209 315 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 CLDND1Q9NY35 253 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 PCDHGA6Q9Y5G7 932 aa8.57□□□□□ -1.04
HPS4-208ENST00000464362 RHPN2P1A8MT19 583 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms