RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SYT5O00445 386 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 GAPDHSO14556 408 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 PGRMC2O15173 223 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CTDSPLO15194 276 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 AKR7A2O43488 359 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 UBXN7O94888 489 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CELF2O95319 508 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SERPIND1P05546 499 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ALPIP09923 528 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 OR4Q2P0C623 313 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF865P0CJ78 1059 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SULT1A3P0DMM9 295 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SULT1A4P0DMN0 295 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SAGP10523 405 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 THPOP40225 353 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ETV5P41161 510 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC1A3P43003 542 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RECQLP46063 649 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 OR1G1P47890 313 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 KCNJ5P48544 419 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 KHKP50053 298 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF81P51508 661 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CDH11P55287 796 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 GMFBP60983 142 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RAP2BP61225 183 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SNRPD2P62316 118 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RPS25P62851 125 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RAE1P78406 368 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 S100A12P80511 92 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 HOXC5Q00444 222 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 FABP5Q01469 135 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SCRN3Q0VDG4 424 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 MAP4K2Q12851 820 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 FCN2Q15485 313 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CCDC85BQ15834 202 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CCL15Q16663 113 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF311Q5JNZ3 666 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 MPP7Q5T2T1 576 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 LDLRAD1Q5T700 205 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 METTL11BQ5VVY1 283 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 FAM71E1Q6IPT2 247 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CXorf57Q6NSI4 855 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 KIAA1161Q6NSJ0 714 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RPL13AP3Q6NVV1 102 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 FAM198BQ6UWH4 519 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 MBOAT1Q6ZNC8 495 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 USP50Q70EL3 339 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC24A5Q71RS6 500 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 TRILQ7L0X0 811 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CCDC36Q8IYA8 594 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 TOMM5Q8N4H5 51 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF655Q8N720 491 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF366Q8N895 744 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 TEX19Q8NA77 164 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 POGLUT1Q8NBL1 392 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 OR4M1Q8NGD0 313 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RPLP0P6Q8NHW5 317 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 RAET1EQ8TD07 263 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 C16orf78Q8WTQ4 265 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SETD7Q8WTS6 366 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 SOCS4Q8WXH5 440 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 PHYHIPQ92561 330 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 PRRC1Q96M27 445 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 MTERF1Q99551 399 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 PKP4Q99569 1192 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 FAM83CQ9BQN1 747 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 GHITMQ9H3K2 345 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 OSGEPL1Q9H4B0 414 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 CCSER2Q9H7U1 834 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 GALNT9Q9HCQ5 603 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 BCL2L10Q9HD36 194 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 ACSS1Q9NUB1 689 aaPredicted RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 TMEM184CQ9NVA4 438 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 KLHL28Q9NXS3 571 aa6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 EXOGQ9Y2C4 368 aaKnown RBP6.77□□□□□ -1.33
CLSTN1-204ENST00000464286 LOC102723532A0A0G2JNH3 316 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 TRBV4-1A0A0J9YWV2 114 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF840PA6NDX5 716 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 E7EQ34 232 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 PRR23D1E9PI22 279 aaPredicted RBP6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 GABRPO00591 440 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF749O43361 778 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 GSTZ1O43708 216 aaPredicted RBP6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 TBL1XO60907 577 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 ATG13O75143 517 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 SC5DO75845 299 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 STC2O76061 302 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 RGS11O94810 467 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 CLDN7O95471 211 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 FGBP02675 491 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 TCRBP04435 133 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 FHP07954 510 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 CLEC2LP0C7M8 214 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 PRR23D2P0DMB1 279 aaPredicted RBP6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 C1GALT1C1LP0DN25 315 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 SRCP12931 536 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 RAB3AP20336 220 aa6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 PAICSP22234 425 aaKnown RBP6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 IGFBP6P24592 240 aaPredicted RBP6.76□□□□□ -1.33
CLSTN1-204ENST00000464286 MAPK3P27361 379 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms