RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 SNTB1Q13884 538 aaKnown RBP13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 CCDC153Q494R4 210 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 CYP27C1Q4G0S4 372 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 EEF1A1P5Q5VTE0 462 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 FAM71E1Q6IPT2 247 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 AAGABQ6PD74 315 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 NPSR1Q6W5P4 371 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 FRMD7Q6ZUT3 714 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 SH2D5Q6ZV89 423 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 TRIM42Q8IWZ5 723 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 C9orf106Q8NAJ2 232 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 WNT2BQ93097 391 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 FOXC2Q99958 501 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 TUBA1CQ9BQE3 449 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 SFXN3Q9BWM7 321 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 PPCSQ9HAB8 311 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 MYNNQ9NPC7 610 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 SENP1Q9P0U3 644 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 TBK1Q9UHD2 729 aa13.05□□□□□ -0.32
SNRNP40-203ENST00000463988 A0A1W2PPM1 405 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 TUBAL3A6NHL2 446 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 H0Y3Z8 333 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 PLOD2O00469 737 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 PROCP04070 461 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 IFI6P09912 130 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 EPXP11678 715 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 GRK2P25098 689 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 SLCO1A2P46721 670 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 CCT5P48643 541 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 DGKQP52824 942 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 IST1P53990 364 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 GAS1P54826 345 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 FOXA1P55317 472 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 BCL2A1Q16548 175 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 IMPG1Q17R60 797 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 IKBIPQ70UQ0 350 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 SLC44A2Q8IWA5 706 aaPredicted RBP13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 RDH11Q8TC12 318 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 NRGNQ92686 78 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 RHOXF2Q9BQY4 288 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 GPATCH1Q9BRR8 931 aaKnown RBP13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 RRAGDQ9NQL2 400 aaPredicted RBP13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 ST6GALNAC2Q9UJ37 374 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 FBXL2Q9UKC9 423 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 C19orf53Q9UNZ5 99 aaPredicted RBP13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 OR10H1Q9Y4A9 318 aa13.04□□□□□ -0.32
SNRNP40-203ENST00000463988 KIAA1549Q9HCM3 1950 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 ZFHX3Q15911 3703 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 ZIC3O60481 467 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 PLIN3O60664 434 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 NME6O75414 186 aaPredicted RBP13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 RSL1D1O76021 490 aaKnown RBP13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 PSMG1O95456 288 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 TACR1P25103 407 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 DPP4P27487 766 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 NTSP30990 170 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 CRHR1P34998 444 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 LHX2P50458 406 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 NCBP2P52298 156 aaKnown RBP eCLIP13.03□□□□□ -0.323e-6■□□□□ 9.3
SNRNP40-203ENST00000463988 PSG6Q00889 435 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 GAB1Q13480 694 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 CDC20BQ86Y33 519 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 TDRPQ86YL5 185 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 OR2L13Q8N349 312 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 GOT1L1Q8NHS2 421 aaPredicted RBP13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 RMND5BQ96G75 393 aaPredicted RBP13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 SFXN2Q96NB2 322 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 G6PC3Q9BUM1 346 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 OXSMQ9NWU1 459 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 CLCF1Q9UBD9 225 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 ABCG2Q9UNQ0 655 aa13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
SNRNP40-203ENST00000463988 ACANP16112 2415 aa13.02□□□□□ -0.32
SNRNP40-203ENST00000463988 TTC36A6NLP5 189 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 CLCA1A8K7I4 914 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 EEF1E1-BLOC1S5C9J1V9 151 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 EEF1E1O43324 174 aaKnown RBP13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 FADS1O60427 444 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 CRCPO75575 148 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 UROSP10746 265 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 ZNF708P17019 499 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 PRPH2P23942 346 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 EVI2BP34910 448 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 AGFG1P52594 562 aaKnown RBP13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 CLDN18P56856 261 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 SRYQ05066 204 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 PRSS53Q2L4Q9 553 aa13.02□□□□□ -0.33
SNRNP40-203ENST00000463988 CFAP157Q5JU67 520 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms