RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TRIM13O60858 407 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 PSMG1O95456 288 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 CPN1P15169 458 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 BMP5P22003 454 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 TACR1P25103 407 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 MRPS22P82650 360 aaKnown RBP17.23■□□□□ 0.35
VARS-220ENST00000461874 ZNF155Q12901 538 aaPredicted RBP17.23■□□□□ 0.35
VARS-220ENST00000461874 PCLAFQ15004 111 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 OR2L13Q8N349 312 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 OR2W6PQ8NHA6 318 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 ZPLD1Q8TCW7 415 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 EFHD2Q96C19 240 aaPredicted RBP17.23■□□□□ 0.35
VARS-220ENST00000461874 ELP4Q96EB1 424 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 EGLN2Q96KS0 407 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 TRMOQ9BU70 441 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 LRTM1Q9HBL6 345 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 C1orf109Q9NX04 203 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 MKS1Q9NXB0 559 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 TAS2R10Q9NYW0 307 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 FBXL2Q9UKC9 423 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 ITGB1BP2Q9UKP3 347 aa17.23■□□□□ 0.35
VARS-220ENST00000461874 ANKRD17O75179 2603 aaKnown RBP17.23■□□□□ 0.35
VARS-220ENST00000461874 ARHGAP21Q5T5U3 1957 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 MBD3L4A6NDZ8 208 aaPredicted RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 MBD3L3A6NE82 208 aaPredicted RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 MBD3L5A6NJ08 208 aaPredicted RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 RGS14O43566 566 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 POU3F2P20265 443 aaPredicted RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 SRD5A2P31213 254 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 ZNF136P52737 540 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 GAS1P54826 345 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 FBXL19-AS1Q494R0 122 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 CYP27C1Q4G0S4 372 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 OR5M10Q6IEU7 315 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 RNF165Q6ZSG1 346 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 Q6ZSR9 355 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 TRIM42Q8IWZ5 723 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 BANPQ8N9N5 519 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 MBD3L2Q8NHZ7 208 aaPredicted RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 APOPT1Q96IL0 206 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 SH3GL2Q99962 352 aa17.22■□□□□ 0.35
VARS-220ENST00000461874 DDX18Q9NVP1 670 aaKnown RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 MRPS18CQ9Y3D5 142 aaKnown RBP17.22■□□□□ 0.35
VARS-220ENST00000461874 NUDT17P0C025 328 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 CYP4B1P13584 511 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 GRK2P25098 689 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 UQCRC1P31930 480 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 PEX19P40855 299 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 ASCL1P50553 236 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 GFRA1P56159 465 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 RCAN2Q14206 197 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 SH2D4BQ5SQS7 431 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 ENPP6Q6UWR7 440 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 TRABD2AQ86V40 505 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 IFNEQ86WN2 208 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 RIBC1Q8N443 379 aaPredicted RBP17.21■□□□□ 0.35
VARS-220ENST00000461874 OR2T11Q8NH01 316 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 DTNBP1Q96EV8 351 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 FCRL1Q96LA6 429 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 TUBA1CQ9BQE3 449 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 IQCGQ9H095 443 aaKnown RBP17.21■□□□□ 0.35
VARS-220ENST00000461874 TUBB1Q9H4B7 451 aa17.21■□□□□ 0.35
VARS-220ENST00000461874 B4DXG7 233 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 ZIC3O60481 467 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 ZWINTO95229 277 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 IFI6P09912 130 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 NEFHP12036 1026 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 CTSSP25774 331 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 EVI2BP34910 448 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 KIR2DL3P43628 341 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 VSNL1P62760 191 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 GAB1Q13480 694 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 SNTB1Q13884 538 aaKnown RBP17.2■□□□□ 0.34
VARS-220ENST00000461874 KANK2Q63ZY3 851 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 AAGABQ6PD74 315 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 ADGRE4PQ86SQ3 457 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 TMEM200AQ86VY9 491 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 C9orf106Q8NAJ2 232 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 RNASE6Q93091 150 aaKnown RBP17.2■□□□□ 0.34
VARS-220ENST00000461874 GFM2Q969S9 779 aaKnown RBP17.2■□□□□ 0.34
VARS-220ENST00000461874 LRRC46Q96FV0 321 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 ZNF764Q96H86 408 aaPredicted RBP17.2■□□□□ 0.34
VARS-220ENST00000461874 CCT7Q99832 543 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 CBLCQ9ULV8 474 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 FIS1Q9Y3D6 152 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 DNAJC15Q9Y5T4 150 aa17.2■□□□□ 0.34
VARS-220ENST00000461874 C17orf51A8MQB3 221 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 H0Y3Z8 333 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 FADS1O60427 444 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 IL18BPO95998 194 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 CHEK2O96017 543 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 FGF4P08620 206 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 LINC00032P0C843 101 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 DPP4P27487 766 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 ALDH3A1P30838 453 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 STARP49675 285 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 LHX2P50458 406 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 SRYQ05066 204 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 TESK1Q15569 626 aa17.19■□□□□ 0.34
VARS-220ENST00000461874 ZNHIT3Q15649 155 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms