RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 OR1J4Q8NGS1 313 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 NEIL3Q8TAT5 605 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 SORT1Q99523 831 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 SLC6A15Q9H2J7 730 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 UBQLN3Q9H347 655 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 TMBIM4Q9HC24 238 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 ACAD8Q9UKU7 415 aa20.57■□□□□ 0.88
TRAF4-207ENST00000461195 EIF3LQ9Y262 564 aaKnown RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 KLF2Q9Y5W3 355 aaPredicted RBP20.57■□□□□ 0.88
TRAF4-207ENST00000461195 PRSS44E7EML9 344 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 GNB5O14775 395 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 TRAPPC6AO75865 159 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 ENDOUP21128 410 aaKnown RBP20.56■□□□□ 0.88
TRAF4-207ENST00000461195 MAGOHP61326 146 aaKnown RBP20.56■□□□□ 0.88
TRAF4-207ENST00000461195 PTGR1Q14914 329 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 CYP27C1Q4G0S4 372 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 WLSQ5T9L3 541 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 OR7A2PQ8NGA2 310 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 GALNT9Q9HCQ5 603 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 Q9N2J8 555 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 SPRR3Q9UBC9 169 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 TNFRSF10DQ9UBN6 386 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 HAO1Q9UJM8 370 aa20.56■□□□□ 0.88
TRAF4-207ENST00000461195 TTC36A6NLP5 189 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 FIGNL2A6NMB9 653 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 SNPHO15079 494 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 HPNP05981 417 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 PTPN6P29350 595 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 TRPC1P48995 793 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 CDK9P50750 372 aaKnown RBP20.55■□□□□ 0.88
TRAF4-207ENST00000461195 SLC18A1P54219 525 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 WDR4P57081 412 aaKnown RBP20.55■□□□□ 0.88
TRAF4-207ENST00000461195 EMX2Q04743 252 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 BST1Q10588 318 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 CASP8Q14790 479 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 SMU1Q2TAY7 513 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 ZNF787Q6DD87 383 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 ZNF585AQ6P3V2 769 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 CEP70Q8NHQ1 597 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 EFHD2Q96C19 240 aaPredicted RBP20.55■□□□□ 0.88
TRAF4-207ENST00000461195 TLCD1Q96CP7 247 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 PPP1R36Q96LQ0 422 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 LMF2Q9BU23 707 aaKnown RBP20.55■□□□□ 0.88
TRAF4-207ENST00000461195 C3orf14Q9HBI5 128 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 ATAD3AQ9NVI7 634 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 NOP53Q9NZM5 478 aaKnown RBP20.55■□□□□ 0.88
TRAF4-207ENST00000461195 CBLCQ9ULV8 474 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 LRBAP50851 2863 aa20.55■□□□□ 0.88
TRAF4-207ENST00000461195 PHF3Q92576 2039 aaKnown RBP20.54■□□□□ 0.88
TRAF4-207ENST00000461195 C2orf72A6NCS6 295 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 PRPS1L1P21108 318 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 ACVR2AP27037 513 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 DCTP40126 519 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 GAB1Q13480 694 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 MLC1Q15049 377 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 TOMM20Q15388 145 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 DECR1Q16698 335 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 CPTPQ5TA50 214 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 WDR53Q7Z5U6 358 aaPredicted RBP20.54■□□□□ 0.88
TRAF4-207ENST00000461195 MARVELD2Q8N4S9 558 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 NATD1Q8N6N6 113 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 NUP43Q8NFH3 380 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 MGARPQ8TDB4 240 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 PRPF18Q99633 342 aaKnown RBP20.54■□□□□ 0.88
TRAF4-207ENST00000461195 AKTIPQ9H8T0 292 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 EQTNQ9NQ60 294 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 ASIC5Q9NY37 505 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 NKIRAS1Q9NYS0 192 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 COQ3Q9NZJ6 369 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 NTMQ9P121 344 aa20.54■□□□□ 0.88
TRAF4-207ENST00000461195 MRTO4Q9UKD2 239 aaKnown RBP20.54■□□□□ 0.88
TRAF4-207ENST00000461195 WDR1O75083 606 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 LAMP1P11279 417 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 G6PDP11413 515 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 EFNA1P20827 205 aaPredicted RBP20.53■□□□□ 0.88
TRAF4-207ENST00000461195 PRKAG1P54619 331 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 SZRD1Q7Z422 152 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 RNF138Q8WVD3 245 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 MAPRE3Q9UPY8 281 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 WIF1Q9Y5W5 379 aa20.53■□□□□ 0.88
TRAF4-207ENST00000461195 C15orf38-AP3S2A0A0A6YYH1 394 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 A0A1W2PRB8 838 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 EMC8O43402 210 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 CBR3O75828 277 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 CLDN14O95500 239 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 CYP4B1P13584 511 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 HTR1EP28566 365 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 GABRA3P34903 492 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 PSMD4P55036 377 aaKnown RBP20.52■□□□□ 0.88
TRAF4-207ENST00000461195 VPS26BQ4G0F5 336 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 SP5Q6BEB4 398 aaPredicted RBP20.52■□□□□ 0.88
TRAF4-207ENST00000461195 ACAD11Q709F0 780 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 RIMKLAQ8IXN7 391 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 RPRMLQ8N4K4 120 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 KRTCAP2Q8N6L1 136 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 CDRT4Q8N9R6 151 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 WDSUB1Q8N9V3 476 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 RND1Q92730 232 aa20.52■□□□□ 0.88
TRAF4-207ENST00000461195 HOXB13Q92826 284 aaPredicted RBP20.52■□□□□ 0.88
TRAF4-207ENST00000461195 SDCCAG3Q96C92 435 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms