RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 FNDC7Q5VTL7 733 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 BICRALQ6AI39 1079 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 SLC30A6Q6NXT4 461 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 TMEM107Q6UX40 140 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 NPSR1Q6W5P4 371 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 R3HCC1LQ7Z5L2 792 aaKnown RBP16.82■□□□□ 0.28
COL9A2-205ENST00000461118 CD163Q86VB7 1156 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 PACS2Q86VP3 889 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 LILRB4Q8NHJ6 448 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 TMBIM1Q969X1 311 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 ZBTB9Q96C00 473 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 ZBED6CLQ96FA7 236 aaPredicted RBP16.82■□□□□ 0.28
COL9A2-205ENST00000461118 SLC35A4Q96G79 324 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 TMEM41AQ96HV5 264 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 ZNF597Q96LX8 424 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 TMUB1Q9BVT8 246 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 UCK2Q9BZX2 261 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 ZNF395Q9H8N7 513 aaPredicted RBP16.82■□□□□ 0.28
COL9A2-205ENST00000461118 ACSS1Q9NUB1 689 aaPredicted RBP16.82■□□□□ 0.28
COL9A2-205ENST00000461118 COQ3Q9NZJ6 369 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 B4GALT7Q9UBV7 327 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 GIMAP2Q9UG22 337 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 ATP6V1HQ9UI12 483 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 RNF6Q9Y252 685 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 LIPGQ9Y5X9 500 aa16.82■□□□□ 0.28
COL9A2-205ENST00000461118 NCKAP5O14513 1909 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 BCKDKO14874 412 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 TSPAN2O60636 221 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 NME6O75414 186 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 SKAP2O75563 359 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 PRPS2P11908 318 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 HOXB4P17483 251 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 DDX5P17844 614 aaKnown RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 MSX1P28360 303 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 RPL3P39023 403 aaKnown RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 RPL14P50914 215 aaKnown RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 ART1P52961 327 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 PNLIPRP2P54317 469 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 GXYLT1Q4G148 440 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 ANKRD26P1Q6NSI1 321 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 ZNF551Q7Z340 670 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 DMRTC2Q8IXT2 367 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 ZNF781Q8N8C0 355 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 CLHC1Q8NHS4 586 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 ZFP28Q8NHY6 868 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 NRGNQ92686 78 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 TLCD1Q96CP7 247 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 COL21A1Q96P44 957 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 NODALQ96S42 347 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 SORT1Q99523 831 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 UBQLN3Q9H347 655 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 TP63Q9H3D4 680 aaPredicted RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 TMBIM4Q9HC24 238 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 DDX18Q9NVP1 670 aaKnown RBP16.81■□□□□ 0.28
COL9A2-205ENST00000461118 SH3BP4Q9P0V3 963 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 NTMQ9P121 344 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 FREM3P0C091 2139 aa16.81■□□□□ 0.28
COL9A2-205ENST00000461118 AKAP6Q13023 2319 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 TRGV5A0A0B4J1U4 118 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 TMEM120BA0PK00 339 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 TTC36A6NLP5 189 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 NPIPA2E9PIF3 369 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 NPIPA3F8WFD2 350 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 ICOSLGO75144 302 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 REM1O75628 298 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 BGNP21810 368 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 PTGDSP41222 190 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 MAN2A2P49641 1150 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 WDR4P57081 412 aaKnown RBP16.8■□□□□ 0.28
COL9A2-205ENST00000461118 EMX2Q04743 252 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 MAD2L1Q13257 205 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-205ENST00000461118 STX3Q13277 289 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 EFR3AQ14156 821 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 MLC1Q15049 377 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 CYP27C1Q4G0S4 372 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 HHATQ5VTY9 493 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 IL23RQ5VWK5 629 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 TIGD3Q6B0B8 471 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 DESI1Q6ICB0 168 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 SLC44A2Q8IWA5 706 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-205ENST00000461118 LIX1Q8N485 282 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 FNDC5Q8NAU1 212 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 CIDECQ96AQ7 238 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-205ENST00000461118 TUBGCP3Q96CW5 907 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 TMCO6Q96DC7 493 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 JSRP1Q96MG2 331 aaPredicted RBP16.8■□□□□ 0.28
COL9A2-205ENST00000461118 LDAHQ9H6V9 325 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 METTL7AQ9H8H3 244 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 ASIC5Q9NY37 505 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 ANKHD1Q8IWZ3 2542 aaKnown RBP16.8■□□□□ 0.28
COL9A2-205ENST00000461118 ARHGAP21Q5T5U3 1957 aa16.8■□□□□ 0.28
COL9A2-205ENST00000461118 SCAMP2O15127 329 aaKnown RBP16.79■□□□□ 0.28
COL9A2-205ENST00000461118 HPNP05981 417 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 DNAJA1P31689 397 aaKnown RBP16.79■□□□□ 0.28
COL9A2-205ENST00000461118 KRT20P35900 424 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 MANFP55145 182 aaKnown RBP16.79■□□□□ 0.28
COL9A2-205ENST00000461118 CASP8Q14790 479 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 PTGR1Q14914 329 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 NATD1Q8N6N6 113 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms