RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 STK17BO94768 372 aa2.55□□□□□ -2
HPS3-203ENST00000460822 FGF4P08620 206 aa2.55□□□□□ -2
HPS3-203ENST00000460822 NCF2P19878 526 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 UQCRC2P22695 453 aa2.55□□□□□ -2
HPS3-203ENST00000460822 CYLC1P35663 651 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 MATKP42679 507 aa2.55□□□□□ -2
HPS3-203ENST00000460822 PPT1P50897 306 aa2.55□□□□□ -2
HPS3-203ENST00000460822 NDST1P52848 882 aa2.55□□□□□ -2
HPS3-203ENST00000460822 PPIAP62937 165 aaKnown RBP2.55□□□□□ -2
HPS3-203ENST00000460822 HERVK_113P63132 956 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ERVK-8P63133 956 aa2.55□□□□□ -2
HPS3-203ENST00000460822 IFT88Q13099 833 aa2.55□□□□□ -2
HPS3-203ENST00000460822 HNRNPDQ14103 355 aaKnown RBP2.55□□□□□ -2
HPS3-203ENST00000460822 RCN1Q15293 331 aa2.55□□□□□ -2
HPS3-203ENST00000460822 TAB1Q15750 504 aa2.55□□□□□ -2
HPS3-203ENST00000460822 TATDN3Q17R31 274 aa2.55□□□□□ -2
HPS3-203ENST00000460822 HKDC1Q2TB90 917 aa2.55□□□□□ -2
HPS3-203ENST00000460822 DCAF4L1Q3SXM0 396 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ACCSLQ4AC99 568 aa2.55□□□□□ -2
HPS3-203ENST00000460822 C1orf189Q5VU69 101 aa2.55□□□□□ -2
HPS3-203ENST00000460822 PYHIN1Q6K0P9 492 aa2.55□□□□□ -2
HPS3-203ENST00000460822 NEPROQ6NW34 567 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ZNF790Q6PG37 636 aa2.55□□□□□ -2
HPS3-203ENST00000460822 SPSB3Q6PJ21 355 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ANGPTL8Q6UXH0 198 aa2.55□□□□□ -2
HPS3-203ENST00000460822 GDPD4Q6W3E5 623 aa2.55□□□□□ -2
HPS3-203ENST00000460822 P4HA3Q7Z4N8 544 aa2.55□□□□□ -2
HPS3-203ENST00000460822 NANOGNBQ7Z5D8 188 aa2.55□□□□□ -2
HPS3-203ENST00000460822 PTAR1Q7Z6K3 402 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 FAM228AQ86W67 206 aa2.55□□□□□ -2
HPS3-203ENST00000460822 NBPF5PQ86XG9 351 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 EFCAB13Q8IY85 973 aa2.55□□□□□ -2
HPS3-203ENST00000460822 PDCL2Q8N4E4 241 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ARFGAP2Q8N6H7 521 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ANKRD7Q92527 254 aa2.55□□□□□ -2
HPS3-203ENST00000460822 SLC25A36Q96CQ1 311 aa2.55□□□□□ -2
HPS3-203ENST00000460822 PRAC1Q96KF2 57 aa2.55□□□□□ -2
HPS3-203ENST00000460822 RAB11FIP5Q9BXF6 653 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ERVK-6Q9BXR3 956 aa2.55□□□□□ -2
HPS3-203ENST00000460822 CHMP4BQ9H444 224 aaKnown RBP2.55□□□□□ -2
HPS3-203ENST00000460822 RPAP3Q9H6T3 665 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 MEAF6Q9HAF1 191 aa2.55□□□□□ -2
HPS3-203ENST00000460822 ETNK2Q9NVF9 386 aa2.55□□□□□ -2
HPS3-203ENST00000460822 TEX10Q9NXF1 929 aaPredicted RBP2.55□□□□□ -2
HPS3-203ENST00000460822 BARHL2Q9NY43 387 aa2.55□□□□□ -2
HPS3-203ENST00000460822 CRLS1Q9UJA2 301 aa2.55□□□□□ -2
HPS3-203ENST00000460822 WIPI2Q9Y4P8 454 aa2.55□□□□□ -2
HPS3-203ENST00000460822 AP4B1Q9Y6B7 739 aa2.55□□□□□ -2
HPS3-203ENST00000460822 CDC42BPGQ6DT37 1551 aa2.55□□□□□ -2
HPS3-203ENST00000460822 NRXN1Q9ULB1 1477 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ANKRD36BQ8N2N9 1353 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PIK3R4Q99570 1358 aa2.54□□□□□ -2
HPS3-203ENST00000460822 LOC390937A0A1W2PQ73 354 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR5H15A6NDH6 313 aa2.54□□□□□ -2
HPS3-203ENST00000460822 HELTA6NFD8 242 aa2.54□□□□□ -2
HPS3-203ENST00000460822 WASH3PC4AMC7 463 aa2.54□□□□□ -2
HPS3-203ENST00000460822 L7N2F9 121 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CFLARO15519 480 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CACNG3O60359 315 aa2.54□□□□□ -2
HPS3-203ENST00000460822 NXPH2O95156 264 aa2.54□□□□□ -2
HPS3-203ENST00000460822 FCER2P06734 321 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CD48P09326 243 aa2.54□□□□□ -2
HPS3-203ENST00000460822 U2AF2P26368 475 aaKnown RBP eCLIP2.54□□□□□ -26e-7■■■■□ 26.4
HPS3-203ENST00000460822 MAT2AP31153 395 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 RFC4P35249 363 aa2.54□□□□□ -2
HPS3-203ENST00000460822 HTR5AP47898 357 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SGSHP51688 502 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SUCLG1P53597 346 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 PRMT2P55345 433 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ABCE1P61221 599 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 CDKL1Q00532 357 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SRYQ05066 204 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PJVKQ0ZLH3 352 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CAMK4Q16566 473 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PARP6Q2NL67 630 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ACSF3Q4G176 576 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 DDI2Q5TDH0 399 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SEL1L3Q68CR1 1132 aa2.54□□□□□ -2
HPS3-203ENST00000460822 C19orf48Q6RUI8 117 aa2.54□□□□□ -2
HPS3-203ENST00000460822 WASH2PQ6VEQ5 465 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ZNF841Q6ZN19 808 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CENPUQ71F23 418 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SLC26A9Q7LBE3 791 aa2.54□□□□□ -2
HPS3-203ENST00000460822 NR2C2APQ86WQ0 139 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PYROXD2Q8N2H3 581 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ANKFN1Q8N957 763 aa2.54□□□□□ -2
HPS3-203ENST00000460822 DDHD1Q8NEL9 900 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR5AP2Q8NGF4 316 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR4D10Q8NGI6 311 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR5M9Q8NGP3 310 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR6S1Q8NH40 331 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR52J3Q8NH60 311 aa2.54□□□□□ -2
HPS3-203ENST00000460822 TRMT10AQ8TBZ6 339 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 RAET1EQ8TD07 263 aa2.54□□□□□ -2
HPS3-203ENST00000460822 EMG1Q92979 244 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 USP28Q96RU2 1077 aa2.54□□□□□ -2
HPS3-203ENST00000460822 NPAS2Q99743 824 aa2.54□□□□□ -2
HPS3-203ENST00000460822 TMEM43Q9BTV4 400 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PITPNM3Q9BZ71 974 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PKIBQ9C010 78 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms