RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 RPP25Q9BUL9 199 aaKnown RBP3.41□□□□□ -1.86
CCDC58-202ENST00000460810 APOOQ9BUR5 198 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 TDRD1Q9BXT4 1180 aaKnown RBP3.41□□□□□ -1.86
CCDC58-202ENST00000460810 EXO5Q9H790 373 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 NRN1Q9NPD7 142 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 UBE2TQ9NPD8 197 aaPredicted RBP3.41□□□□□ -1.86
CCDC58-202ENST00000460810 MAN2C1Q9NTJ4 1040 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 UTP6Q9NYH9 597 aaKnown RBP3.41□□□□□ -1.86
CCDC58-202ENST00000460810 TAAR2Q9P1P5 351 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 GNG12Q9UBI6 72 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 PISDQ9UG56 409 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 SUN2Q9UH99 717 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 RNF6Q9Y252 685 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 PIGLQ9Y2B2 252 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 WDR45Q9Y484 360 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 MMP24Q9Y5R2 645 aa3.41□□□□□ -1.86
CCDC58-202ENST00000460810 FBLL1A6NHQ2 334 aaKnown RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 SNTNA6NMZ2 147 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 NBR2O15453 112 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 CFLARO15519 480 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 EFNA2O43921 213 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 TIMM8AO60220 97 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 OAS1P00973 400 aaKnown RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 AGTP01019 485 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 OPN1LWP04000 364 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 IGF1P05019 195 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 FHP07954 510 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 GSTA1P08263 222 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 POLR2MP0CAP2 368 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 ADORA3P0DMS8 318 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 PRKAR1AP10644 381 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 C4BPBP20851 252 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 GIFP27352 417 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 MAGEA5P43359 124 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 MAGEA8P43361 318 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 BRCC3P46736 316 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 CASP4P49662 377 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 PGFP49763 221 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 AP3M2P53677 418 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 XGP55808 180 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 EWSR1Q01844 656 aaKnown RBP eCLIP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 SLC17A1Q14916 467 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 SSX2Q16385 188 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 DPYSL2Q16555 572 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 GLIPR1L2Q4G1C9 344 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 TMEM52BQ4KMG9 183 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 RFTN2Q52LD8 501 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 WDR38Q5JTN6 314 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 BEND6Q5SZJ8 279 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 CELF3Q5SZQ8 465 aaKnown RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 C16orf87Q6PH81 154 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 TMEM184AQ6ZMB5 413 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 DCUN1D3Q8IWE4 304 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 SLC22A15Q8IZD6 547 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 GVQW1Q8N7I0 195 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 OR2T11Q8NH01 316 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 C18orf25Q96B23 403 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 RIT2Q99578 217 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 NKX3-1Q99801 234 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 CITED1Q99966 193 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 MTG1Q9BT17 334 aaPredicted RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 CHRDL1Q9BU40 450 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 BICC1Q9H694 974 aaKnown RBP3.4□□□□□ -1.87
CCDC58-202ENST00000460810 SIX2Q9NPC8 291 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 NLGN3Q9NZ94 848 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 TUBGCP4Q9UGJ1 667 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 PCSK1NQ9UHG2 260 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 TCF19Q9Y242 345 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 ZHX2Q9Y6X8 837 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 SYNJ2O15056 1496 aa3.4□□□□□ -1.87
CCDC58-202ENST00000460810 KANK1Q14678 1352 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 BTBD17A6NE02 478 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 MSGN1A6NI15 193 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 PCP4L1A6NKN8 68 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 FAM74A7A6NL05 159 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 TCP10L2B9ZVM9 353 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 P2RY10O00398 339 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 ABCD4O14678 606 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 STX7O15400 261 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 RANBP6O60518 1105 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 ECDO95905 644 aaPredicted RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 IGSF6O95976 241 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 PAK4O96013 591 aaPredicted RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 STAG3L3P0CL85 134 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 DBTP11182 482 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 ANXA3P12429 323 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 CCT6AP40227 531 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 CCT3P49368 545 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 NOP14P78316 857 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 CSTF1Q05048 431 aaKnown RBP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 ENPEPQ07075 957 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 ILF3Q12906 894 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC58-202ENST00000460810 ENPP2Q13822 863 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 HAGHQ16775 308 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 KIF26BQ2KJY2 2108 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 FAM74A3Q4VXF1 159 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 CEP85LQ5SZL2 805 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 DDI2Q5TDH0 399 aa3.39□□□□□ -1.87
CCDC58-202ENST00000460810 CARD17Q5XLA6 110 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms