RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 PRPS2P11908 318 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 GRK2P25098 689 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 PTGER4P35408 488 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 ABCE1P61221 599 aaKnown RBP21■□□□□ 0.95
PTPN4-208ENST00000460289 HSPB3Q12988 150 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 CDSNQ15517 529 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 C6orf136Q5SQH8 315 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 OR4N2Q8NGD1 307 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 MARVELD3Q96A59 401 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 CIDECQ96AQ7 238 aaPredicted RBP21■□□□□ 0.95
PTPN4-208ENST00000460289 DTNBP1Q96EV8 351 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 C3orf30Q96M34 536 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 TTYH2Q9BSA4 534 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 C3orf14Q9HBI5 128 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 Q9N2J8 555 aa21■□□□□ 0.95
PTPN4-208ENST00000460289 EPB41L3Q9Y2J2 1087 aaPredicted RBP21■□□□□ 0.95
PTPN4-208ENST00000460289 CRYBG3Q68DQ2 2970 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 FAM47E-STBD1D6RA91 191 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 LYPLA1O75608 230 aaPredicted RBP20.99■□□□□ 0.95
PTPN4-208ENST00000460289 CHRNB4P30926 498 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 HPCAL1P37235 193 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 FRKP42685 505 aaPredicted RBP20.99■□□□□ 0.95
PTPN4-208ENST00000460289 NUP107P57740 925 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 DECR1Q16698 335 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 KIRREL3Q8IZU9 778 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 RPRMLQ8N4K4 120 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 FNDC5Q8NAU1 212 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 CEP70Q8NHQ1 597 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 EFHD2Q96C19 240 aaPredicted RBP20.99■□□□□ 0.95
PTPN4-208ENST00000460289 TUBGCP3Q96CW5 907 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 LMF2Q9BU23 707 aaKnown RBP20.99■□□□□ 0.95
PTPN4-208ENST00000460289 ATP6V1HQ9UI12 483 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 CBLCQ9ULV8 474 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 RNF6Q9Y252 685 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 CELSR2Q9HCU4 2923 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 EXPH5Q8NEV8 1989 aa20.99■□□□□ 0.95
PTPN4-208ENST00000460289 C2orf72A6NCS6 295 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 ITM2AO43736 263 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 GCKP35557 465 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 PSMD4P55036 377 aaKnown RBP20.98■□□□□ 0.95
PTPN4-208ENST00000460289 MAD2L1Q13257 205 aaPredicted RBP20.98■□□□□ 0.95
PTPN4-208ENST00000460289 GAB1Q13480 694 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 SF3B4Q15427 424 aaKnown RBP eCLIP20.98■□□□□ 0.95
PTPN4-208ENST00000460289 VPS26BQ4G0F5 336 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 ZNF385BQ569K4 471 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 NHSL2Q5HYW2 709 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 C1orf185Q5T7R7 199 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 RTL6Q6ICC9 239 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 PM20D2Q8IYS1 436 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 WDSUB1Q8N9V3 476 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 OR10Q1Q8NGQ4 319 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 LILRB4Q8NHJ6 448 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 PRPF18Q99633 342 aaKnown RBP20.98■□□□□ 0.95
PTPN4-208ENST00000460289 TIMP4Q99727 224 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 GIMAP2Q9UG22 337 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 EIF3LQ9Y262 564 aaKnown RBP20.98■□□□□ 0.95
PTPN4-208ENST00000460289 RAP2CQ9Y3L5 183 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 FAM215AQ9Y5M1 114 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 WIF1Q9Y5W5 379 aa20.98■□□□□ 0.95
PTPN4-208ENST00000460289 AHRRA9YTQ3 701 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 SCAMP2O15127 329 aaKnown RBP20.97■□□□□ 0.95
PTPN4-208ENST00000460289 GLI4P10075 376 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 COX6B1P14854 86 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 SLC1A6P48664 564 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 MPP2Q14168 576 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 MLC1Q15049 377 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 IL23RQ5VWK5 629 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 CES4AQ5XG92 561 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 VASNQ6EMK4 673 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 PLCZ1Q86YW0 608 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 NATD1Q8N6N6 113 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 RNF138Q8WVD3 245 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 ZBTB9Q96C00 473 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 C1orf50Q9BV19 199 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 ATAD3AQ9NVI7 634 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 NTMQ9P121 344 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 MAPRE3Q9UPY8 281 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 NOTCH2Q04721 2471 aa20.97■□□□□ 0.95
PTPN4-208ENST00000460289 NCKAP5O14513 1909 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 CYP4B1P13584 511 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 RPL14P50914 215 aaKnown RBP20.96■□□□□ 0.95
PTPN4-208ENST00000460289 PRKAG1P54619 331 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 CRYZQ08257 329 aaKnown RBP20.96■□□□□ 0.95
PTPN4-208ENST00000460289 SMU1Q2TAY7 513 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 EIPR1Q53HC9 387 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 WIPI1Q5MNZ9 446 aaPredicted RBP20.96■□□□□ 0.95
PTPN4-208ENST00000460289 CPTPQ5TA50 214 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 HHATQ5VTY9 493 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 ULK2Q8IYT8 1036 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 ZNF781Q8N8C0 355 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 CDRT4Q8N9R6 151 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 FAM83FQ8NEG4 500 aaPredicted RBP20.96■□□□□ 0.95
PTPN4-208ENST00000460289 NUP43Q8NFH3 380 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 ZNF395Q9H8N7 513 aaPredicted RBP20.96■□□□□ 0.95
PTPN4-208ENST00000460289 SERHLQ9NQF3 203 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 SLC6A5Q9Y345 797 aa20.96■□□□□ 0.95
PTPN4-208ENST00000460289 EMC8O43402 210 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 KCNH1O95259 989 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 IL33O95760 270 aa20.95■□□□□ 0.94
PTPN4-208ENST00000460289 ACTL6AO96019 429 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms