RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SNTG1Q9NSN8 517 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 TAS2R16Q9NYV7 291 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 IL20Q9NYY1 176 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 EXOGQ9Y2C4 368 aaKnown RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 SPIN1Q9Y657 262 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-202ENST00000459727 V9GYH0 126 aa8.3□□□□□ -1.08
HDAC3-202ENST00000459727 DOCK6Q96HP0 2047 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 A0A087WV62 115 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 A0A1W2PP55 124 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 TRAPPC13A5PLN9 417 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CCDC182A6NF36 153 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 FABP12A6NFH5 140 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ISM1B1AKI9 464 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 FAM227AF5H4B4 570 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 TNFRSF10CO14798 259 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RGS13O14921 159 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 B3GALT2O43825 422 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 TMEM127O75204 238 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 KCNK2O95069 426 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CDRT1O95170 752 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RCBTB2O95199 551 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 IGHA1P01876 353 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CEACAM5P06731 702 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 DBIP07108 87 aaKnown RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CHRM5P08912 532 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ATXN8OSP0DMR3 200 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 PAICSP22234 425 aaKnown RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 F8A1P23610 371 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 SLC1A3P43003 542 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 OMPP47874 163 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RAB25P57735 213 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ERVK-21P61565 698 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 SKP1P63208 163 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 FUT5Q11128 374 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 POU4F2Q12837 409 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 HYAL2Q12891 473 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 HNRNPA0Q13151 305 aaKnown RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 DUSP8Q13202 625 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 GPM6BQ13491 265 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RIN1Q13671 783 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CAMK1Q14012 370 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 GPR19Q15760 415 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 KCNJ8Q15842 424 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 HACD4Q5VWC8 232 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RSBN1Q5VWQ0 802 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 LIPKQ5VXJ0 399 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 MFSD12Q6NUT3 480 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 TMEM107Q6UX40 140 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 FAM131AQ6UXB0 335 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF620Q6ZNG0 422 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 PAQR7Q86WK9 346 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 SNX29P2Q8IUI4 249 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 GPALPP1Q8IXQ4 340 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CCDC116Q8IYX3 515 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CDK20Q8IZL9 346 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 NLGN4XQ8N0W4 816 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 OR2L13Q8N349 312 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 VWA5B2Q8N398 1253 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 IL17RDQ8NFM7 739 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 SLC2A12Q8TD20 617 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 GPR151Q8TDV0 419 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 GANCQ8TET4 914 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 LCN9Q8WX39 176 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 BADQ92934 168 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ELSPBP1Q96BH3 223 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 OTULINQ96BN8 352 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 C1GALT1C1Q96EU7 318 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 MRPL48Q96GC5 212 aaKnown RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ZFYVE19Q96K21 471 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 HS6ST2Q96MM7 605 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF681Q96N22 645 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 DEPDC7Q96QD5 511 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 STACQ99469 402 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 MCHR1Q99705 422 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 APOOQ9BUR5 198 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 TRAF4Q9BUZ4 470 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 TMEM106CQ9BVX2 250 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 SLC17A9Q9BYT1 436 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 HOXD1Q9GZZ0 328 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 KCNK12Q9HB15 430 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 MBNL1Q9NR56 388 aaKnown RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 INIPQ9NRY2 104 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 C5AR2Q9P296 337 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RABL2AQ9UBK7 228 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CLEC2DQ9UHP7 191 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 PCOLCE2Q9UKZ9 415 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 RABL2BQ9UNT1 228 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CLCA2Q9UQC9 943 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 KCNK6Q9Y257 313 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF443Q9Y2A4 671 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 NCKAP1Q9Y2A7 1128 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 CAB39Q9Y376 341 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-202ENST00000459727 WDR45Q9Y484 360 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 GPSM3Q9Y4H4 160 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ATG4BQ9Y4P1 393 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 OR1A2Q9Y585 309 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 ENTPD2Q9Y5L3 495 aa8.29□□□□□ -1.08
HDAC3-202ENST00000459727 A0A1W2PQU0 124 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 PRSS38A1L453 326 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms