RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 LIM2P55344 173 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 C21orf58P58505 322 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ID2Q02363 134 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 STX4Q12846 297 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 ACKR1Q16570 336 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SPIN4Q56A73 249 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 Q6ZSR9 355 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 UBE3DQ7Z6J8 389 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 PM20D2Q8IYS1 436 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 METTL4Q8N3J2 472 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 OR10G3Q8NGC4 313 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TWIST2Q8WVJ9 160 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 CCT6BQ92526 530 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 KCNA7Q96RP8 456 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 PIGQQ9BRB3 760 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 TBCDQ9BTW9 1192 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 DOHHQ9BU89 302 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 REXO4Q9GZR2 422 aaKnown RBP10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SLCO1B3Q9NPD5 702 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 VPS29Q9UBQ0 182 aa10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 CNOT11Q9UKZ1 510 aaKnown RBP10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 SONP18583 2426 aaKnown RBP10.28□□□□□ -0.76
PRAMEF35P-201ENST00000458709 A0A0A6YYD5 115 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SLC28A1O00337 649 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 LSM1O15116 133 aaKnown RBP10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 CTNSO60931 367 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 ERN1O75460 977 aaKnown RBP10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TRAPPC6AO75865 159 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 HMOX2P30519 316 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 BSGP35613 385 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SOX18P35713 384 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PTH2RP49190 550 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 HTR6P50406 440 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 GUCY1A3Q02108 690 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TGM3Q08188 693 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 CLEC6AQ6EIG7 209 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 VASNQ6EMK4 673 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 MRM1Q6IN84 353 aaKnown RBP10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PLXDC2Q6UX71 529 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 LARP4Q71RC2 724 aaKnown RBP eCLIP10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 MAVSQ7Z434 540 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 NUBPLQ8TB37 319 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SLC22A8Q8TCC7 542 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SELENOMQ8WWX9 145 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PIK3IP1Q96FE7 263 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 WDYHV1Q96HA8 205 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 ZNF597Q96LX8 424 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PAIP2Q9BPZ3 127 aaKnown RBP10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 UGT2B28Q9BY64 529 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SHCBP1LQ9BZQ2 653 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PRDM7Q9NQW5 492 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 FARSBQ9NSD9 589 aaKnown RBP10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TMEM45AQ9NWC5 275 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 COPS7AQ9UBW8 275 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 DAPP1Q9UN19 280 aa10.27□□□□□ -0.77
PRAMEF35P-201ENST00000458709 A0A088AWK7 358 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SYNDIG1LA6NDD5 238 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TRPC5OSA6NMA1 111 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TMEM233B4DJY2 109 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 HRKO00198 91 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PLPP1O14494 284 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PIP5K1BO14986 540 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 RGS14O43566 566 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TRIM3O75382 744 aaPredicted RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 JUNP05412 331 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 FBXO45P0C2W1 286 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 FPR1P21462 350 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 ZNF10P21506 573 aaPredicted RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 HIST1H1TP22492 207 aaPredicted RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 LSP1P33241 339 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 CPOXP36551 454 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 CDK9P50750 372 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 NEK2P51955 445 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 NR1H2P55055 460 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 RPS13P62277 151 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TRA2BP62995 288 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 CAPRIN1Q14444 709 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SF3B4Q15427 424 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 EIPR1Q53HC9 387 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TCHHL1Q5QJ38 904 aaPredicted RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 BICRALQ6AI39 1079 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TRIM40Q6P9F5 258 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 EPGNQ6UW88 154 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 WDR75Q8IWA0 830 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 GCNT2Q8N0V5 402 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 MAPK1IP1LQ8NDC0 245 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 C7orf57Q8NEG2 295 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 OR2T11Q8NH01 316 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 ACTRT2Q8TDY3 377 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 DOK4Q8TEW6 326 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 TMEM158Q8WZ71 300 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 RGMAQ96B86 450 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 PPP3R2Q96LZ3 170 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 SERINC2Q96SA4 455 aa10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 MTERF1Q99551 399 aaKnown RBP10.26□□□□□ -0.77
PRAMEF35P-201ENST00000458709 CENPKQ9BS16 269 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms