RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CYP4B1P13584 511 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 GABRA3P34903 492 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 NME5P56597 212 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 PSG6Q00889 435 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 EMX2Q04743 252 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 STX5Q13190 355 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 EFR3AQ14156 821 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 DECR1Q16698 335 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 GXYLT1Q4G148 440 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 AGBL2Q5U5Z8 902 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 ATG16L1Q676U5 607 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 OR5M10Q6IEU7 315 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 RPRMLQ8N4K4 120 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 ITLN2Q8WWU7 325 aaPredicted RBP17.09■□□□□ 0.33
USP39-209ENST00000458268 RMND5BQ96G75 393 aaPredicted RBP17.09■□□□□ 0.33
USP39-209ENST00000458268 PRPF18Q99633 342 aaKnown RBP17.09■□□□□ 0.33
USP39-209ENST00000458268 TP63Q9H3D4 680 aaPredicted RBP17.09■□□□□ 0.33
USP39-209ENST00000458268 C3orf14Q9HBI5 128 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 PLSCR2Q9NRY7 297 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 ZCCHC3Q9NUD5 404 aaKnown RBP17.09■□□□□ 0.33
USP39-209ENST00000458268 RYDENQ9NUL5 291 aaKnown RBP17.09■□□□□ 0.33
USP39-209ENST00000458268 ATAD3AQ9NVI7 634 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 ATP6V1HQ9UI12 483 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 CBLCQ9ULV8 474 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 SLC6A5Q9Y345 797 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 DOPEY1Q5JWR5 2465 aa17.09■□□□□ 0.33
USP39-209ENST00000458268 GXYLT2A0PJZ3 443 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 OR6C70A6NIJ9 312 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 EMC8O43402 210 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 TSPAN2O60636 221 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 TBX19O60806 448 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 ABCB7O75027 752 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 C6orf47O95873 294 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 IGHG3P01860 377 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 DIO3P55073 304 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 GAB1Q13480 694 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 TP53BP2Q13625 1128 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 HYAL4Q2M3T9 481 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 EIPR1Q53HC9 387 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 WIPI1Q5MNZ9 446 aaPredicted RBP17.08■□□□□ 0.32
USP39-209ENST00000458268 WLSQ5T9L3 541 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 ZNF787Q6DD87 383 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 NXNQ6DKJ4 435 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 SLC30A6Q6NXT4 461 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 RPTNQ6XPR3 784 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 YRDCQ86U90 279 aaKnown RBP17.08■□□□□ 0.32
USP39-209ENST00000458268 TRIM42Q8IWZ5 723 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 SARAFQ96BY9 339 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 SDCCAG3Q96C92 435 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 TMEM41AQ96HV5 264 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 MANSC1Q9H8J5 431 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 ACSS1Q9NUB1 689 aaPredicted RBP17.08■□□□□ 0.32
USP39-209ENST00000458268 HRH3Q9Y5N1 445 aa17.08■□□□□ 0.32
USP39-209ENST00000458268 NUP214P35658 2090 aaPredicted RBP17.08■□□□□ 0.32
USP39-209ENST00000458268 C17orf51A8MQB3 221 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 E9PLN8 166 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 AQP7O14520 342 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 BCKDKO14874 412 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 GMFGO60234 142 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 SNUPNO95149 360 aaKnown RBP17.07■□□□□ 0.32
USP39-209ENST00000458268 LBPP18428 481 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 PRPS1L1P21108 318 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 PTGDSP41222 190 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 MRPS22P82650 360 aaKnown RBP17.07■□□□□ 0.32
USP39-209ENST00000458268 FNDC7Q5VTL7 733 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 KIRREL3Q8IZU9 778 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 ZNF808Q8N4W9 903 aaPredicted RBP17.07■□□□□ 0.32
USP39-209ENST00000458268 OR10Q1Q8NGQ4 319 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 OR5AK3PQ8NH89 298 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 SLC35A4Q96G79 324 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 C16orf58Q96GQ5 468 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 ZNF764Q96H86 408 aaPredicted RBP17.07■□□□□ 0.32
USP39-209ENST00000458268 MS4A4EQ96PG1 132 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 VKORC1Q9BQB6 163 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 DUSP26Q9BV47 211 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 DPY30Q9C005 99 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 THAP1Q9NVV9 213 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 FLRT3Q9NZU0 649 aa17.07■□□□□ 0.32
USP39-209ENST00000458268 FIGNL2A6NMB9 653 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 SNPHO15079 494 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 SUSD5O60279 629 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 HCN1O60741 890 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 KCNH1O95259 989 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 ACP2P11117 423 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 ENDOUP21128 410 aaKnown RBP17.06■□□□□ 0.32
USP39-209ENST00000458268 PTPN6P29350 595 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 PNLIPRP2P54317 469 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 PRR5P85299 388 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 VPS26BQ4G0F5 336 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 TTMPQ5BVD1 217 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 EMC4Q5J8M3 183 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 OR4F3Q6IEY1 312 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 FIGNL1Q6PIW4 674 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 HDXQ7Z353 690 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 OR4K17Q8NGC6 315 aa17.06■□□□□ 0.32
USP39-209ENST00000458268 OR14L1PQ8NHC6 308 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms