RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 ZYG11AQ6WRX3 759 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 CDC20BQ86Y33 519 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 PLCZ1Q86YW0 608 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 SLC44A2Q8IWA5 706 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 GOT1L1Q8NHS2 421 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 EFHD2Q96C19 240 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 BTBD9Q96Q07 612 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 MDFIQ99750 246 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 EPB41L4BQ9H329 900 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 TAS2R9Q9NYW1 312 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 ZNF629Q9UEG4 869 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 EXO1Q9UQ84 846 aaKnown RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 POLR3HQ9Y535 204 aaPredicted RBP14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 WIF1Q9Y5W5 379 aa14.33□□□□□ -0.12
CHCHD3-204ENST00000457942 A0A1W2PPM1 405 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 KIAA1324LA8MWY0 1029 aaPredicted RBP14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 SYT5O00445 386 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 FOSL1P15407 271 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 DDCP20711 480 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 TACR1P25103 407 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 OPRM1P35372 400 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 FOXA1P55317 472 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 PSPHP78330 225 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 MRPS22P82650 360 aaKnown RBP14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 FLYWCH1Q4VC44 716 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 OR5M10Q6IEU7 315 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 GALNT18Q6P9A2 607 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 CLEC9AQ6UXN8 241 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 NPSR1Q6W5P4 371 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 BIVMQ86UB2 503 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 WDSUB1Q8N9V3 476 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 OR7G2Q8NG99 324 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 OR4K17Q8NGC6 315 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 SLC35A4Q96G79 324 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 VSTM2LQ96N03 204 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 SFXN2Q96NB2 322 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 SH3GL2Q99962 352 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 SHCBP1LQ9BZQ2 653 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 OR2B2Q9GZK3 357 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 STMN4Q9H169 189 aaPredicted RBP14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 RASSF1Q9NS23 344 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 TAS2R10Q9NYW0 307 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 FOXD3Q9UJU5 478 aaPredicted RBP14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 EMCNQ9ULC0 261 aa14.32□□□□□ -0.12
CHCHD3-204ENST00000457942 MBD3L4A6NDZ8 208 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 MBD3L3A6NE82 208 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 MBD3L5A6NJ08 208 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 G3V2L1 256 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 UBFD1O14562 309 aaKnown RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 SCO2O43819 266 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 TMIGD3P0DMS9 266 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CT45A8P0DMV1 189 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CT45A9P0DMV2 189 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CTSSP25774 331 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 SRD5A2P31213 254 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 MC3RP41968 323 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CPA2P48052 419 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CCT5P48643 541 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 NAA20P61599 178 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CCDC153Q494R4 210 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CT45A2Q5DJT8 189 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 AAGABQ6PD74 315 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 TMEM107Q6UX40 140 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 PAMR1Q6UXH9 720 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 FRMD7Q6ZUT3 714 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 KIF18BQ86Y91 864 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 TRIM42Q8IWZ5 723 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 C9orf106Q8NAJ2 232 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 MBD3L2Q8NHZ7 208 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 MZB1Q8WU39 189 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 TUBA1CQ9BQE3 449 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 TXLNGYQ9BZA5 131 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 CALHM2Q9HA72 323 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 DDX18Q9NVP1 670 aaKnown RBP14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 PPP4R1LQ9P1A2 415 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 FBXL2Q9UKC9 423 aa14.31□□□□□ -0.12
CHCHD3-204ENST00000457942 TUBAL3A6NHL2 446 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 H3BQF6 201 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 COPEO14579 308 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 PLOD3O60568 738 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 TSPAN2O60636 221 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 PROCP04070 461 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 SHBGP04278 402 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 GRK2P25098 689 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 RFX3P48380 749 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 PNLIPRP2P54317 469 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 STX5Q13190 355 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 ZNHIT3Q15649 155 aaPredicted RBP14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 PRIMA1Q86XR5 153 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 OR4N2Q8NGD1 307 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 ZPLD1Q8TCW7 415 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 FAM222BQ8WU58 562 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 C18orf12Q96KH6 178 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 MYNNQ9NPC7 610 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 GRID1Q9ULK0 1009 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 FIS1Q9Y3D6 152 aa14.3□□□□□ -0.12
CHCHD3-204ENST00000457942 SERTM1A2A2V5 107 aa14.29□□□□□ -0.12
CHCHD3-204ENST00000457942 A6NNC1 897 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms