RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 RAB5CP51148 216 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 PRPS1P60891 318 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 LSM11P83369 360 aaKnown RBP eCLIP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 DHODHQ02127 395 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ARHGEF7Q14155 803 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 HABP2Q14520 560 aaPredicted RBP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 EML3Q32P44 896 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SIRPB2Q5JXA9 342 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SAMD4BQ5PRF9 694 aaKnown RBP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ARMC12Q5T9G4 340 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ABLIM2Q6H8Q1 611 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 MED27Q6P2C8 311 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 NCEH1Q6PIU2 408 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 PLET1Q6UQ28 207 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 TMEM107Q6UX40 140 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 IL20RBQ6UXL0 311 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 BAIAP2L2Q6UXY1 529 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 TIFABQ6ZNK6 161 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ZNF687Q8N1G0 1237 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ARMC10Q8N2F6 343 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SVBPQ8N300 66 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 TMEM132CQ8N3T6 1108 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 FAM160A2Q8N612 972 aaPredicted RBP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SETD9Q8NE22 299 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 OR4C15Q8NGM1 316 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SELENOMQ8WWX9 145 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ING5Q8WYH8 240 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 OR1E3Q8WZA6 343 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 TM9SF4Q92544 642 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SMARCD2Q92925 531 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SLC38A4Q969I6 547 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ISG20Q96AZ6 181 aaKnown RBP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 MFSD3Q96ES6 412 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 NOL4LQ96MY1 436 aaPredicted RBP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 SLC38A2Q96QD8 506 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 HS3ST6Q96QI5 342 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 DMRTA2Q96SC8 542 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 YIPF4Q9BSR8 244 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 BBS2Q9BXC9 721 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ING2Q9H160 280 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 DUSP21Q9H596 190 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 REEP4Q9H6H4 257 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 WDR41Q9HAD4 459 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 BCO1Q9HAY6 547 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 CAPN10Q9HC96 672 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 CHRAC1Q9NRG0 131 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 ZFP57Q9NU63 452 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 TMEM184CQ9NVA4 438 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 NSMCE4AQ9NXX6 385 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 MRPS18CQ9Y3D5 142 aaKnown RBP6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 COL4A2P08572 1712 aa6.45□□□□□ -1.38
CUBNP3-201ENST00000457461 TRIOBPQ9H2D6 2365 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TBC1D3KA0A087X1G2 549 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TTC24A2A3L6 582 aaPredicted RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 WASHC1A8K0Z3 465 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 A8MV72 311 aaPredicted RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 WASH3PC4AMC7 463 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 RFXAPO00287 272 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 LDLRAD4O15165 306 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 LDB2O43679 373 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 GGCTO75223 188 aaKnown RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 MT-CO1P00395 513 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 F10P00742 488 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 IGHV2-5P01817 119 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 SPP1P10451 314 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TYRP14679 529 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TPH1P17752 444 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 FSHRP23945 695 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 PSMB6P28072 239 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 GTF2E2P29084 291 aaKnown RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 MPIP34949 423 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 THBS4P35443 961 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 MAGEA12P43365 314 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 CSRP3P50461 194 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 CLDN20P56880 219 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 SNRPD2P62316 118 aaKnown RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 REEP5Q00765 189 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 ITKQ08881 620 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 FASTKQ14296 549 aaKnown RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 DPY19L1Q2PZI1 675 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 GAB4Q2WGN9 574 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TCEAL5Q5H9L2 206 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 FAM78AQ5JUQ0 283 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 LY6G5CQ5SRR4 150 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 C9orf64Q5T6V5 341 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TSTD2Q5T7W7 516 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 PRAMEF13Q5VWM6 474 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 METAP1DQ6UB28 335 aaPredicted RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 EPGNQ6UW88 154 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 CES3Q6UWW8 571 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 LINGO4Q6UY18 593 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 TRIM46Q7Z4K8 759 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 ZBTB46Q86UZ6 589 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 ADHFE1Q8IWW8 467 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 ETFBKMTQ8IXQ9 262 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 SLC44A3Q8N4M1 653 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 C1orf52Q8N6N3 182 aaKnown RBP6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 PLA2G15Q8NCC3 412 aa6.44□□□□□ -1.38
CUBNP3-201ENST00000457461 OR56A3Q8NH54 315 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms