RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 ZNF473Q8WTR7 871 aaKnown RBP7.55□□□□□ -1.2
LINC00963-206ENST00000453213 UBE2E3Q969T4 207 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 TMBIM1Q969X1 311 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 RGMAQ96B86 450 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 MUCL1Q96DR8 90 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 CMTM7Q96FZ5 175 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 PDLIM5Q96HC4 596 aaKnown RBP7.55□□□□□ -1.2
LINC00963-206ENST00000453213 FOXN4Q96NZ1 517 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 SOX7Q9BT81 388 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 ITPAQ9BY32 194 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 DSN1Q9H410 356 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 LYARQ9NX58 379 aaKnown RBP7.55□□□□□ -1.2
LINC00963-206ENST00000453213 PPP4R1LQ9P1A2 415 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 BCAP29Q9UHQ4 241 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 OARD1Q9Y530 152 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 AP4B1Q9Y6B7 739 aa7.55□□□□□ -1.2
LINC00963-206ENST00000453213 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00963-206ENST00000453213 YLPM1P49750 1951 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 LOC390937A0A1W2PQ73 354 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 A0A1W2PR48 441 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 A0A1W2PS29 197 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 EIF1AYO14602 144 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 SMAD9O15198 467 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 MBD3O95983 291 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 ADAP00813 363 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 CCDC175P0C221 793 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 CD22P20273 847 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 DRD5P21918 477 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 AGTR1P30556 359 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 SERPINB1P30740 379 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 CASP2P42575 452 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 IRF8Q02556 426 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 KIF5AQ12840 1032 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 EFR3AQ14156 821 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 GANABQ14697 944 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 SEL1L2Q5TEA6 688 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 GTF2IRD2BQ6EKJ0 949 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 OR52E8Q6IFG1 317 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 DEF8Q6ZN54 512 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 Q6ZSR9 355 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 BHLHA15Q7RTS1 189 aaPredicted RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 GTF2IRD2Q86UP8 949 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 CNGA4Q8IV77 575 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 ZCCHC7Q8N3Z6 543 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 MRPL24Q96A35 216 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 NXNL1Q96CM4 212 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 WDR34Q96EX3 536 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 JMJD8Q96S16 334 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 ADOQ96SZ5 270 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 HBEGFQ99075 208 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 TRMOQ9BU70 441 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 DDX47Q9H0S4 455 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 OR51B5Q9H339 312 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 CNOT10Q9H9A5 744 aaKnown RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 PAQR5Q9NXK6 330 aaPredicted RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 PCDHB10Q9UN67 800 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 MGAT4BQ9UQ53 548 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 EPN1Q9Y6I3 576 aaPredicted RBP7.54□□□□□ -1.2
LINC00963-206ENST00000453213 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
LINC00963-206ENST00000453213 VWFP04275 2813 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 NCF1BA6NI72 391 aaPredicted RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 NCF1CA8MVU1 366 aaPredicted RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 B4DXG7 233 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 CBFA2T2O43439 604 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 PRAMEF4O60810 478 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 NTN1O95631 604 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 AHSGP02765 367 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 FAM58BPP0C7Q3 252 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 NCF1P14598 390 aaPredicted RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 S1PR1P21453 382 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 APEX1P27695 318 aaKnown RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 GABRB3P28472 473 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 IL12BP29460 328 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 KRT20P35900 424 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 PPICP45877 212 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 XKP51811 444 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 CHN2P52757 468 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 HILS1P60008 231 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 ITGADQ13349 1161 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 EXOSC7Q15024 291 aaKnown RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 ACAP2Q15057 778 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 PDK4Q16654 411 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 TMEM201Q5SNT2 666 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 PRAMEF9Q5VWM5 478 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 MFSD12Q6NUT3 480 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 ZNF544Q6NX49 715 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 MED27Q6P2C8 311 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 SHQ1Q6PI26 577 aaKnown RBP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 CYP20A1Q6UW02 462 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 TMEM108Q6UXF1 575 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 TFAP2EQ6VUC0 442 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 USP43Q70EL4 1123 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 LARP4Q71RC2 724 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC00963-206ENST00000453213 SSX8Q7RTT4 187 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 GGNQ86UU5 652 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 CCDC170Q8IYT3 715 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 SYCE1Q8N0S2 351 aa7.53□□□□□ -1.2
LINC00963-206ENST00000453213 FADS6Q8N9I5 356 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms