RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 P4HA3Q7Z4N8 544 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 DHDDSQ86SQ9 333 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPSM1Q86YR5 675 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 UEVLDQ8IX04 471 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CMTM8Q8IZV2 173 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC5A8Q8N695 610 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 Q8N9G6 341 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 RNF149Q8NC42 400 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CCDC112Q8NEF3 446 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR1L6Q8NGR2 347 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 RP9Q8TA86 221 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 TEX47Q8TBZ9 253 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM3CQ92520 227 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CD101Q93033 1021 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 TSACCQ96A04 125 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 CCDC127Q96BQ5 260 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ECHDC3Q96DC8 303 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 MTBPQ96DY7 904 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF503Q96F45 646 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 PELI1Q96FA3 418 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 PPP1R36Q96LQ0 422 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 TSSK3Q96PN8 268 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC38A2Q96QD8 506 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 IL4I1Q96RQ9 567 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SH3GL3Q99963 347 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 C1QTNF7Q9BXJ2 289 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 LRRN3Q9H3W5 708 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 ASB8Q9H765 288 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 Q9H8V8 135 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 POLD4Q9HCU8 107 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 NOX4Q9NPH5 578 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 B3GAT1Q9P2W7 334 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 MIOXQ9UGB7 285 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 WARS2Q9UGM6 360 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 UTS2RQ9UKP6 389 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 PRPF19Q9UMS4 504 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 MEMO1Q9Y316 297 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 RAP2CQ9Y3L5 183 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 SAMHD1Q9Y3Z3 626 aaKnown RBP4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 TIMM22Q9Y584 194 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 NOX1Q9Y5S8 564 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 URGCP-MRPS24S4R325 110 aa4.04□□□□□ -1.76
HMGB3P21-201ENST00000452483 FRMPD4Q14CM0 1322 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 A0A0G2JLW4 131 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 FABP12A6NFH5 140 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SMLR1H3BR10 107 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 H3BTX0 84 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 LIN7AO14910 233 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 HAT1O14929 419 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ARPC1BO15143 372 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SIVA1O15304 175 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR10H3O60404 316 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 UGDHO60701 494 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 LPXNO60711 386 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SCELO95171 688 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 TXNDC12O95881 172 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 PIGRP01833 764 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 RPN2P04844 631 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ELANEP08246 267 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF26P17031 533 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 MAGP20916 626 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SYT1P21579 422 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 CD82P27701 267 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 PCK1P35558 622 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 HMGCLP35914 325 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 APOBEC1P41238 236 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 NPBWR2P48146 333 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 CSNK1DP48730 415 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 MAZP56270 477 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ERVK-25P63136 954 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 LCN2P80188 198 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 MRPS25P82663 173 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 REEP5Q00765 189 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SRYQ05066 204 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 GABPAQ06546 454 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 RAD51Q06609 339 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SNTA1Q13424 505 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ELAVL1Q15717 326 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC5A12Q1EHB4 618 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ODF4Q2M2E3 257 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 C5orf47Q569G3 176 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SFT2D3Q587I9 215 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 XKR6Q5GH73 641 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 KIAA1755Q5JYT7 1200 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ELFN2Q5R3F8 820 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF691Q5VV52 312 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPR107Q5VW38 600 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLX4IPQ5VYV7 408 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 DCDC5Q6ZRR9 648 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 G2E3Q7L622 706 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 TRMT1LQ7Z2T5 733 aaKnown RBP4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM122BQ7Z309 247 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPBP1Q86WP2 473 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 SFTPA2Q8IWL1 248 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPC2Q8N158 579 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 BEST3Q8N1M1 668 aa4.03□□□□□ -1.76
HMGB3P21-201ENST00000452483 CLEC4FQ8N1N0 589 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms