RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CD96P40200 585 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 MAP3K8P41279 467 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 PRIM2P49643 509 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 HLCSP50747 726 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ANXA11P50995 505 aaKnown RBP12.02□□□□□ -0.49
VPS33A-202ENST00000451053 DCAF7P61962 342 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ARG2P78540 354 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ZNHIT3Q15649 155 aaPredicted RBP12.02□□□□□ -0.49
VPS33A-202ENST00000451053 MSRB3Q8IXL7 192 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 SLC15A3Q8IY34 581 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 TAGAPQ8N103 731 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 FBXW8Q8N3Y1 598 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 TMEM156Q8N614 296 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 SLC15A4Q8N697 577 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 RBMXL3Q8N7X1 1067 aaKnown RBP12.02□□□□□ -0.49
VPS33A-202ENST00000451053 CDRT4Q8N9R6 151 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 SLC16A11Q8NCK7 471 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 CATSPER1Q8NEC5 780 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 TNIP2Q8NFZ5 429 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ZFP90Q8TF47 636 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ASB15Q8WXK1 588 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 SLC9A6Q92581 669 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 JADE3Q92613 823 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 HAS2Q92819 552 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 NEURL3Q96EH8 262 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 WBP1Q96G27 269 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 AURKBQ96GD4 344 aaPredicted RBP12.02□□□□□ -0.49
VPS33A-202ENST00000451053 SLC35G5Q96KT7 338 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ECSITQ9BQ95 431 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 UTP23Q9BRU9 249 aaKnown RBP12.02□□□□□ -0.49
VPS33A-202ENST00000451053 ACTRT3Q9BYD9 372 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 TPT1P8Q9HAU6 139 aa12.02□□□□□ -0.49
VPS33A-202ENST00000451053 GXYLT2A0PJZ3 443 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OR5H15A6NDH6 313 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 NME4O00746 187 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 TO15178 435 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ACOX3O15254 700 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 NKX2-2O95096 273 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 STAMBPO95630 424 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ALOX5P09917 674 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 FBXO45P0C2W1 286 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 HSD17B1P14061 328 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ME2P23368 584 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ABCD3P28288 659 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 GABRA3P34903 492 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 CASRP41180 1078 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 MAN2A2P49641 1150 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 NRG3P56975 720 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 MTPNP58546 118 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OC90Q02509 493 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 PLCXD2Q0VAA5 305 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 FADDQ13158 208 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OR1C1Q15619 314 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 DUSP5Q16690 384 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ZNF791Q3KP31 576 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 CDC73Q6P1J9 531 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OPN5Q6U736 354 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ANGPTL8Q6UXH0 198 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 IL20RBQ6UXL0 311 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ZNF227Q86WZ6 799 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 SLC34A3Q8N130 599 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ZADH2Q8N4Q0 377 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 MDS2Q8NDY4 140 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OR5D16Q8NGK9 328 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 PNPT1Q8TCS8 783 aaKnown RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 GPR151Q8TDV0 419 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 TM9SF4Q92544 642 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 PIK3R3Q92569 461 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 TMBIM1Q969X1 311 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 SPACA9Q96E40 222 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OMA1Q96E52 524 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 SIGLEC12Q96PQ1 595 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 UBL7Q96S82 380 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 SLC25A18Q9H1K4 315 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 ALG2Q9H553 416 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 TRIM45Q9H8W5 580 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 CMTM6Q9NX76 183 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 FAF1Q9UNN5 650 aaPredicted RBP12.01□□□□□ -0.49
VPS33A-202ENST00000451053 OR10H1Q9Y4A9 318 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 NPFFR2Q9Y5X5 522 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 KCNE3Q9Y6H6 103 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 MGAQ8IWI9 3026 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
VPS33A-202ENST00000451053 CACNA1GO43497 2377 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 TTC36A6NLP5 189 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 A8MVJ9 347 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 ATXN7O15265 892 aaPredicted RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 DPM1O60762 260 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 NEURL1O76050 574 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 GPX2P18283 190 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 MATN1P21941 496 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 CYB561P49447 251 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 TNFSF10P50591 281 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 MVDP53602 400 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 FBXW4P57775 412 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms