RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TIMP3P35625 211 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 WNT3P56703 355 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 PSG6Q00889 435 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 CYP27C1Q4G0S4 372 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 CES4AQ5XG92 561 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 KANK2Q63ZY3 851 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 NSUN5P2Q63ZY6 315 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 ENPP6Q6UWR7 440 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 RNF165Q6ZSG1 346 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 Q6ZSR9 355 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 IFNEQ86WN2 208 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 DDIASQ8IXT1 998 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 TNIP2Q8NFZ5 429 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 OR4N2Q8NGD1 307 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 ZFP28Q8NHY6 868 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 ELP4Q96EB1 424 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 WDYHV1Q96HA8 205 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 AMDHD1Q96NU7 426 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 CCT7Q99832 543 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 OR2B2Q9GZK3 357 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 Q9N2J8 555 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 SLC17A7Q9P2U7 560 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 KCNN3Q9UGI6 736 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 LGALS13Q9UHV8 139 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 DKKL1Q9UK85 242 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 LRBAP50851 2863 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 ARHGAP21Q5T5U3 1957 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 SLU7O95391 586 aaKnown RBP13.9□□□□□ -0.18
CHD3-205ENST00000449744 CHRNGP07510 517 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 CYP4B1P13584 511 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 BMP5P22003 454 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 GRK2P25098 689 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 SRD5A2P31213 254 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 CEACAM8P31997 349 aaPredicted RBP13.9□□□□□ -0.18
CHD3-205ENST00000449744 RPL38P63173 70 aaKnown RBP13.9□□□□□ -0.18
CHD3-205ENST00000449744 HSPB3Q12988 150 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 DECR1Q16698 335 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 GALNTL6Q49A17 601 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
CHD3-205ENST00000449744 DCST1Q5T197 706 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 OR5M10Q6IEU7 315 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TRIM42Q8IWZ5 723 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 OR2L13Q8N349 312 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 OR4K17Q8NGC6 315 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 OR2T11Q8NH01 316 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TCP10LQ8TDR4 215 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 AENQ8WTP8 325 aaKnown RBP13.9□□□□□ -0.18
CHD3-205ENST00000449744 TWIST2Q8WVJ9 160 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 PPCDCQ96CD2 204 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TSSK3Q96PN8 268 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 MECRQ9BV79 373 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TUBB1Q9H4B7 451 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 REEP4Q9H6H4 257 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 C3orf14Q9HBI5 128 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 SDHAF3Q9NRP4 125 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TAS2R10Q9NYW0 307 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 SH3BP4Q9P0V3 963 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 ITGB1BP2Q9UKP3 347 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 CBLCQ9ULV8 474 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TMED5Q9Y3A6 229 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 TRAF6Q9Y4K3 522 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 DNAJC15Q9Y5T4 150 aa13.9□□□□□ -0.18
CHD3-205ENST00000449744 INTS1Q8N201 2190 aaKnown RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 CD8B2A6NJW9 211 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 H0Y3Z8 333 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 AKAP10O43572 662 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 SCO2O43819 266 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 FGF4P08620 206 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 IFI6P09912 130 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 DDX5P17844 614 aaKnown RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 SDC1P18827 310 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 UQCRC1P31930 480 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 EVI2BP34910 448 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 RFX3P48380 749 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 CLK3P49761 638 aaKnown RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 PSMD4P55036 377 aaKnown RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 KRTAP10-9P60411 292 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 SRYQ05066 204 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 GAB1Q13480 694 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 RFTN2Q52LD8 501 aaPredicted RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 ANKRD26P1Q6NSI1 321 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 WDR93Q6P2C0 686 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 AAGABQ6PD74 315 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 ZNF551Q7Z340 670 aaPredicted RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 NAXEQ8NCW5 288 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 ZPLD1Q8TCW7 415 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 AGR3Q8TD06 166 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 SFXN2Q96NB2 322 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 CALHM2Q9HA72 323 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 PPP4R1LQ9P1A2 415 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 ZNF629Q9UEG4 869 aaPredicted RBP13.89□□□□□ -0.19
CHD3-205ENST00000449744 FBXL2Q9UKC9 423 aa13.89□□□□□ -0.19
CHD3-205ENST00000449744 MBD3L4A6NDZ8 208 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 MBD3L3A6NE82 208 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 MBD3L5A6NJ08 208 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 TTC36A6NLP5 189 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 TMEM114B3SHH9 223 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 TMEM233B4DJY2 109 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 PIP5K1BO14986 540 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms