RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CDSNQ15517 529 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 CPTPQ5TA50 214 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 LCE2DQ5TA82 110 aaPredicted RBP13.36□□□□□ -0.27
USP39-206ENST00000448971 BICRALQ6AI39 1079 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 NPSR1Q6W5P4 371 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 FAM109AQ8N4B1 249 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 KRTCAP2Q8N6L1 136 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 LRRC8CQ8TDW0 803 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 TMBIM1Q969X1 311 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 RILPQ96NA2 401 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 MS4A4EQ96PG1 132 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 SECISBP2Q96T21 854 aaKnown RBP13.36□□□□□ -0.27
USP39-206ENST00000448971 OSBPL11Q9BXB4 747 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 Q9N2J8 555 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 ACSS1Q9NUB1 689 aaPredicted RBP13.36□□□□□ -0.27
USP39-206ENST00000448971 KLRF1Q9NZS2 232 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 GPR55Q9Y2T6 319 aaPredicted RBP13.36□□□□□ -0.27
USP39-206ENST00000448971 GOLGA8QA0A0J9YX86 632 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 A0A1W2PRB8 838 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 GOLGA8OA6NCC3 632 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 GOLGA8NF8WBI6 632 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 SLCO1B7G3V0H7 640 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 C19orf84I3L1E1 186 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 KLF11O14901 512 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 TO15178 435 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 UGT2B11O75310 529 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 SASH3O75995 380 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 ABCB1P08183 1280 aaPredicted RBP13.35□□□□□ -0.27
USP39-206ENST00000448971 IFI6P09912 130 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 CT45A8P0DMV1 189 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 CT45A9P0DMV2 189 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 LAMP1P11279 417 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 NAGAP17050 411 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 FRKP42685 505 aaPredicted RBP13.35□□□□□ -0.27
USP39-206ENST00000448971 MAGEA5P43359 124 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 RFX3P48380 749 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 DIO3P55073 304 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 KRTAP10-9P60411 292 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 CT45A2Q5DJT8 189 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 TMEM198Q66K66 360 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 PAOXQ6QHF9 649 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 WDR53Q7Z5U6 358 aaPredicted RBP13.35□□□□□ -0.27
USP39-206ENST00000448971 LRRC34Q8IZ02 419 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 TMEM251Q8N6I4 163 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 FBXO30Q8TB52 745 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 EFHD2Q96C19 240 aaPredicted RBP13.35□□□□□ -0.27
USP39-206ENST00000448971 DPY30Q9C005 99 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 DEFB127Q9H1M4 99 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
USP39-206ENST00000448971 C3orf14Q9HBI5 128 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 ZFP64Q9NPA5 681 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 ITGB1BP2Q9UKP3 347 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 MAPRE3Q9UPY8 281 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 ZNF835Q9Y2P0 537 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 SNX8Q9Y5X2 465 aa13.35□□□□□ -0.27
USP39-206ENST00000448971 A0A1B0GTH9 108 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PRAMEF25A6NGN4 478 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 LRRC3CA6NJW4 275 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 SDHDO14521 159 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 CFLARO15519 480 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PDE9AO76083 593 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 GLSO94925 669 aaPredicted RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 PSMG1O95456 288 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 GDF1P27539 372 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 EPHA3P29320 983 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 SOAT1P35610 550 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 KIR3DL1P43629 444 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 CLDN8P56748 225 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PRR5P85299 388 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PSG6Q00889 435 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 FOXO1Q12778 655 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 C3AR1Q16581 482 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PGS1Q32NB8 556 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 SPDYE7PQ495Y7 208 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 NXNQ6DKJ4 435 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 DESI1Q6ICB0 168 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 LARP4Q71RC2 724 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP39-206ENST00000448971 NUP54Q7Z3B4 507 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 WDR75Q8IWA0 830 aaKnown RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 NATD1Q8N6N6 113 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 NUP43Q8NFH3 380 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 JADE3Q92613 823 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 ZNF75CPQ92670 426 aaPredicted RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 HGDQ93099 445 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 TMCO6Q96DC7 493 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 CHMP6Q96FZ7 201 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 COL21A1Q96P44 957 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 NODALQ96S42 347 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 ADOQ96SZ5 270 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 DUSP26Q9BV47 211 aa13.34□□□□□ -0.27
USP39-206ENST00000448971 BHLHE41Q9C0J9 482 aaPredicted RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 WDR55Q9H6Y2 383 aaPredicted RBP13.34□□□□□ -0.27
USP39-206ENST00000448971 EXO5Q9H790 373 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms