RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 PGBD2Q6P3X8 592 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 PODNL1Q6PEZ8 512 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 BMP8AQ7Z5Y6 402 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 C1orf210Q8IVY1 113 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 GALNT12Q8IXK2 581 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 METTL27Q8N6F8 245 aaPredicted RBP16.5■□□□□ 0.23
LMNA-208ENST00000448611 OR52R1Q8NGF1 315 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 TUBA1CQ9BQE3 449 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 SAP130Q9H0E3 1048 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 DUSP21Q9H596 190 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 PRTFDC1Q9NRG1 225 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 SEMA5BQ9P283 1151 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 REV1Q9UBZ9 1251 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 FTSJ1Q9UET6 329 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 RSL24D1Q9UHA3 163 aaKnown RBP16.5■□□□□ 0.23
LMNA-208ENST00000448611 SLC13A4Q9UKG4 626 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 ZNF443Q9Y2A4 671 aaPredicted RBP16.5■□□□□ 0.23
LMNA-208ENST00000448611 IFT52Q9Y366 437 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 COMMD3-BMI1R4GMX3 469 aa16.5■□□□□ 0.23
LMNA-208ENST00000448611 WDFY4Q6ZS81 3184 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 AGAP5A6NIR3 686 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 PTGES3LE9PB15 166 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 OR10H3O60404 316 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 CD1CP29017 333 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 SEPHS1P49903 392 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 SLC35A2P78381 396 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 BTG2P78543 158 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 STX4Q12846 297 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 KANSL1Q7Z3B3 1105 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 Q8N9G6 341 aaPredicted RBP16.49■□□□□ 0.23
LMNA-208ENST00000448611 FAM81AQ8TBF8 368 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 NODALQ96S42 347 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 FANCEQ9HB96 536 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 PILRBQ9UKJ0 227 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 CENPVL1A0A0U1RR11 272 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 CLDN4O14493 209 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 FRS3O43559 492 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 COQ9O75208 318 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 STX11O75558 287 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 RPS4Y1P22090 263 aaKnown RBP16.49■□□□□ 0.23
LMNA-208ENST00000448611 CHMP24386 653 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 EPHA8P29322 1005 aaPredicted RBP16.49■□□□□ 0.23
LMNA-208ENST00000448611 TTKP33981 857 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 KRT20P35900 424 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 CRISP1P54107 249 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 PTGES3Q15185 160 aaKnown RBP16.49■□□□□ 0.23
LMNA-208ENST00000448611 PEX5LQ8IYB4 626 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 NLGN4XQ8N0W4 816 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 COX18Q8N8Q8 333 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 MORN4Q8NDC4 146 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 RHOXF1Q8NHV9 184 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 GPR151Q8TDV0 419 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 NR4A3Q92570 626 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 RIT1Q92963 219 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 RBM18Q96H35 190 aaKnown RBP16.49■□□□□ 0.23
LMNA-208ENST00000448611 DGCR6LQ9BY27 220 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 ALOXE3Q9BYJ1 711 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 UCK2Q9BZX2 261 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 FBXO34Q9NWN3 711 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 KLHL28Q9NXS3 571 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 NLGN3Q9NZ94 848 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 TPRKBQ9Y3C4 175 aa16.49■□□□□ 0.23
LMNA-208ENST00000448611 OR2W5A6NFC9 320 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 ZAR1LA6NP61 321 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 TMEM150CB9EJG8 249 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 OR2B3O76000 313 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 NKX2-2O95096 273 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 AK1P00568 194 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 THBS1P07996 1170 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 GABRB1P18505 474 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 HSD17B7P56937 341 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 ZNF836Q6ZNA1 936 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 PRSS42Q7Z5A4 293 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 ZNF619Q8N2I2 560 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 D2HGDHQ8N465 521 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 DTWD2Q8NBA8 298 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 OR51Q1Q8NH59 317 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 GAB3Q8WWW8 586 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 DIO2Q92813 273 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 SLC41A2Q96JW4 573 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 PRR14Q9BWN1 585 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 VCX3AQ9NNX9 186 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 CTPS2Q9NRF8 586 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 CUTCQ9NTM9 273 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 SCN3BQ9NY72 215 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 PTTG2Q9NZH5 202 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 TNRC6BQ9UPQ9 1833 aaKnown RBP16.48■□□□□ 0.23
LMNA-208ENST00000448611 SPTBP11277 2137 aa16.48■□□□□ 0.23
LMNA-208ENST00000448611 CLDN24A6NM45 220 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 ZNF749O43361 778 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 KIAA0513O60268 411 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 OSMP13725 252 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 MAOAP21397 527 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 AVPR2P30518 371 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 GABRA3P34903 492 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 GCGRP47871 477 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 IDH2P48735 452 aaKnown RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 EMDP50402 254 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms