RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 LRR1Q96L50 414 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 CXorf58Q96LI9 332 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 OPALINQ96PE5 141 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF317Q96PQ6 595 aaPredicted RBP3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 BTBD9Q96Q07 612 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 PCDHB18PQ96TA0 734 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 CNPY3Q9BT09 278 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 SPATA16Q9BXB7 569 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 GBA3Q9H227 469 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 LHX5Q9H2C1 402 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 MED20Q9H944 212 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 INIPQ9NRY2 104 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 FGF21Q9NSA1 209 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 HIF1ANQ9NWT6 349 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 HACD3Q9P035 362 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 ATXN10Q9UBB4 475 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 ONECUT1Q9UBC0 465 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 PILRAQ9UKJ1 303 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 SPATA2Q9UM82 520 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 ETV7Q9Y603 341 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 RNF215Q9Y6U7 377 aa3.68□□□□□ -1.82
CDC42BPA-207ENST00000441725 PTPRGP23470 1445 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 PTCH1Q13635 1447 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 ALKQ9UM73 1620 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 LOC101059948A0A1B0GTJ6 334 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 BCLAF3A2AJT9 711 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 FUOMA2VDF0 154 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 ASPDHA6ND91 283 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 TRPC5OSA6NMA1 111 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 TEX46H3BTG2 121 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 HAS3O00219 553 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 SYNGR4O95473 234 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 NSA2O95478 260 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 NUDT3O95989 172 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 APOA1P02647 267 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 STAG3L2P0CL84 134 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CCDC166P0CW27 439 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 GP1BBP13224 206 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF12P17014 697 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 FBLP22087 321 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CRABP2P29373 138 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 HOXA9P31269 272 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 RORAP35398 523 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 HMGCLP35914 325 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 SERPINB9P50453 376 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 DPTQ07507 201 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 MERTKQ12866 999 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 SPHARQ15513 63 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 HLFQ16534 295 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 HSDL1Q3SXM5 330 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF260Q3ZCT1 412 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 UTS2BQ765I0 119 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 COPS6Q7L5N1 327 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 BHLHA15Q7RTS1 189 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 PLD3Q8IV08 490 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 SLC38A6Q8IZM9 456 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CLEC4FQ8N1N0 589 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 DNAJC22Q8N4W6 341 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 NRACQ8N912 160 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 FADS6Q8N9I5 356 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 OR10T2Q8NGX3 314 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 OR4L1Q8NH43 312 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF473Q8WTR7 871 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 ING5Q8WYH8 240 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 MCHR2Q969V1 340 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 RAB39BQ96DA2 213 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 C4orf36Q96KX1 117 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CEP170P1Q96L14 293 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CCDC42Q96M95 316 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CBWD1Q9BRT8 395 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 PRRG3Q9BZD7 231 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 HDHD2Q9H0R4 259 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 DHX33Q9H6R0 707 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 UBTD1Q9HAC8 227 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CHST11Q9NPF2 352 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 POT1Q9NUX5 634 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 PEF1Q9UBV8 284 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 MAD1L1Q9Y6D9 718 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 CCDC171Q6TFL3 1326 aa3.67□□□□□ -1.82
CDC42BPA-207ENST00000441725 MTMR11A4FU01 709 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 SMCO2A6NFE2 343 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF732B4DXR9 585 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ERVV-2B6SEH9 535 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FOXE1O00358 373 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 POLR1CO15160 346 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 EIF3HO15372 352 aaKnown RBP eCLIP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF264O43296 627 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NDUFA2O43678 99 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 XPNPEP2O43895 674 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 STX10O60499 249 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CSO75390 466 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 COX5BP10606 129 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NCF2P19878 526 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NT5EP21589 574 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FCARP24071 287 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 UCP1P25874 307 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 RBMS1P29558 406 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms