RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CA10Q9NS85 328 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TDP1Q9NUW8 608 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 GPATCH2Q9NW75 528 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MFSD2BA6NFX1 497 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CPSF4LA6NMK7 179 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 E7EQ34 232 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 NDUFA2O43678 99 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SOD1P00441 154 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 EPOP01588 193 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 WNT1P04628 370 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 H1F0P07305 194 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RHOCP08134 193 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 KCNE1P15382 129 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CPEP16870 476 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM11P17152 192 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ANXA7P20073 488 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MMP12P39900 470 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 XCR1P46094 333 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 PITPNBP48739 271 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 PSMA6P60900 246 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CACNG1Q06432 222 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SERTAD2Q14140 314 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RBMS2Q15434 407 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SLC25A35Q3KQZ1 300 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SLC30A6Q6NXT4 461 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 LIMS2Q7Z4I7 341 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TMPRSS11BQ86T26 416 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 NR2C2APQ86WQ0 139 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF565Q8N9K5 539 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 BBS1Q8NFJ9 593 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZNF671Q8TAW3 534 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CSGALNACT1Q8TDX6 532 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZDHHC1Q8WTX9 485 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TADA1Q96BN2 335 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 GAS2L1Q99501 681 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 PLA2G12AQ9BZM1 189 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MCOLN1Q9GZU1 580 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 EVA1AQ9H8M9 152 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ISG20L2Q9H9L3 353 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 DNAJC11Q9NVH1 559 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SLC39A1Q9NY26 324 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TAS2R3Q9NYW6 316 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MBD1Q9UIS9 605 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SCP2D1Q9UJQ7 156 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ST3GAL5Q9UNP4 418 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ARID1BQ8NFD5 2236 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CCDC88CQ9P219 2028 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 F8W036 122 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 STMND1H3BQB6 276 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 FMO6PO60774 539 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CELF2O95319 508 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 IGLV3-25P01717 112 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RLN1P04808 185 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ALPPL2P10696 532 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HPGDP15428 266 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 AHCYP23526 432 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MTNR1AP48039 350 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CDH11P55287 796 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RHOAP61586 193 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RPS13P62277 151 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 FGL1Q08830 312 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TAF10Q12962 218 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HSPB3Q12988 150 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TUSC3Q13454 348 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HTR4Q13639 388 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 PUM1Q14671 1186 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 Q3ZCU0 254 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ARHGAP15Q53QZ3 475 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RNF219Q5W0B1 726 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 HAGHLQ6PII5 290 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TRMT11Q7Z4G4 463 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 OR4D9Q8NGE8 314 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 WDR48Q8TAF3 677 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ARSGQ96EG1 525 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SCMH1Q96GD3 660 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TRIB3Q96RU7 358 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 MNTQ99583 582 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 SLC38A3Q99624 504 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 REG4Q9BYZ8 158 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ACTR6Q9GZN1 396 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ESRP2Q9H6T0 727 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 KCNK12Q9HB15 430 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 TMEM45AQ9NWC5 275 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 FAM120CQ9NX05 1096 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 LYARQ9NX58 379 aaKnown RBP7.1□□□□□ -1.27
HDAC9-214ENST00000441542 POMT2Q9UKY4 750 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 LIPT1Q9Y234 373 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 RCE1Q9Y256 329 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CHST2Q9Y4C5 530 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CSNK1G3Q9Y6M4 447 aa7.1□□□□□ -1.27
HDAC9-214ENST00000441542 CKAP5Q14008 2032 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 A0A0G2JN53 185 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 ARL5CA6NH57 179 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SLC9B1P1A6NJY1 282 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 GPR31O00270 319 aa7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SCAMP2O15127 329 aaKnown RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 MAGEB4O15481 346 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-214ENST00000441542 SLC2A10O95528 541 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms