RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CCNHP51946 323 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RAD23AP54725 363 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ADPRHP54922 357 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KRTAP10-6P60371 365 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZP1P60852 638 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CDKL1Q00532 357 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LIPEQ05469 1076 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CSTF3Q12996 717 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TRAF3Q13114 568 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KEAP1Q14145 624 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RCAN2Q14206 197 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CAPRIN1Q14444 709 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ABRAXAS2Q15018 415 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TEAD2Q15562 447 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RPE65Q16518 533 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 PHKG1Q16816 387 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 IMPG1Q17R60 797 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRRC26Q2I0M4 334 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ALG11Q2TAA5 492 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 FUT11Q495W5 492 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 PAGE3Q5JUK9 113 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LRRC66Q68CR7 880 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 NANOGP8Q6NSW7 305 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 BRAT1Q6PJG6 821 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC30A9Q6PML9 568 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 GDPD4Q6W3E5 623 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZBTB49Q6ZSB9 765 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RNF165Q6ZSG1 346 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TSPAN33Q86UF1 283 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TMEM200AQ86VY9 491 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 IFNEQ86WN2 208 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZFAND4Q86XD8 727 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TMEM25Q86YD3 366 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TBC1D21Q8IYX1 336 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CMTM8Q8IZV2 173 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TCAIMQ8N3R3 496 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 AADATQ8N5Z0 425 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLDN19Q8N6F1 224 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 PACRGLQ8N7B6 248 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ANKFN1Q8N957 763 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SCAIQ8N9R8 606 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LEMD2Q8NC56 503 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 C11orf65Q8NCR3 313 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 FAM110DQ8TAY7 271 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LKAAEAR1Q8TD35 194 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 UBTD2Q8WUN7 234 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CANT1Q8WVQ1 401 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 OIT3Q8WWZ8 545 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 VPS33AQ96AX1 596 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLCO4A1Q96BD0 722 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 PPWD1Q96BP3 646 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RHBDF1Q96CC6 855 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ECHDC3Q96DC8 303 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 OTUB2Q96DC9 234 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TEX37Q96LM6 180 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF597Q96LX8 424 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CNBD2Q96M20 576 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ADAD1Q96M93 576 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 MCCC1Q96RQ3 725 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ABHD1Q96SE0 405 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TSC22D3Q99576 134 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SH3GL1Q99961 368 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KCTD14Q9BQ13 255 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC39A3Q9BRY0 314 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 H2AFJQ9BTM1 129 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 C9orf16Q9BUW7 83 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 NTMT1Q9BV86 223 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 OSBPL11Q9BXB4 747 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 BBS2Q9BXC9 721 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC2A11Q9BYW1 496 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SEMA6AQ9H2E6 1030 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LINC00597Q9H2U6 94 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 C6orf106Q9H6K1 298 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZDHHC6Q9H6R6 413 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 NANOGQ9H9S0 305 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 Q9N2J8 555 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 C8orf4Q9NR00 106 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HEBP1Q9NRV9 189 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SNTG1Q9NSN8 517 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ELOVL2Q9NXB9 296 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 UBAP1Q9NZ09 502 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 MRPL15Q9P015 296 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KIAA1456Q9P272 454 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ABI3Q9P2A4 366 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF490Q9ULM2 529 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 AURKCQ9UQB9 309 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ERVW-1Q9UQF0 538 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HS3ST2Q9Y278 367 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 AP3M1Q9Y2T2 418 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RNF11Q9Y3C5 154 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 NUP205Q92621 2012 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 IGLV3-16A0A075B6K0 115 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 RNF103-CHMP3A0A140T963 221 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SMIM31A0A1B0GVY4 71 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 TSPAN11A1L157 253 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 ASPDHA6ND91 283 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 A8MV72 311 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 A8MXE2 369 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 NEDD8-MDP1E9PL57 170 aa3.23□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC9A3R1O14745 358 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms