RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 PCGF2P35227 344 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 PIGAP37287 484 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ANXA11P50995 505 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 POU6F2P78424 691 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 MRPS22P82650 360 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 CDC20Q12834 499 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SCARB2Q14108 478 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 VEZF1Q14119 521 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 TRIM25Q14258 630 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 CYP27C1Q4G0S4 372 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 CCNJQ5T5M9 372 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 HLA-DQA1Q5Y7H0 255 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ERICH5Q6P6B1 374 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ZAR1Q86SH2 424 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 PTRH1Q86Y79 214 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 BCORP1Q8N888 145 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 COX18Q8N8Q8 333 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 C11orf65Q8NCR3 313 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ZG16BQ96DA0 208 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 TMEM19Q96HH6 336 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 FER1L6-AS2Q96M78 137 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 TRNT1Q96Q11 434 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 RSPO3Q9BXY4 272 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 RUBCNLQ9H714 662 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 Q9N2J8 555 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 EXD2Q9NVH0 621 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 CBLCQ9ULV8 474 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 LIPT1Q9Y234 373 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 PCDHGB3Q9Y5G1 929 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ARGFXA6NJG6 315 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 A8MUI8 341 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ACOX3O15254 700 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SLC28A2O43868 658 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 DNAJB5O75953 348 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 PGM3O95394 542 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 H6PDO95479 791 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 BCHEP06276 602 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 GUSBP08236 651 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 NR2F1P10589 423 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 CRYBA2P53672 197 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SOX8P57073 446 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 PCBP3P57721 371 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 MLF1P58340 268 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 TLE3Q04726 772 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 CHRNEQ04844 493 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 AIMP2Q13155 320 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 DCST2Q5T1A1 773 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ATAD3BQ5T9A4 648 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 FCRLBQ6BAA4 426 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 REEP3Q6NUK4 255 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 JMJD6Q6NYC1 403 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 FIGNL1Q6PIW4 674 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 LRRC74BQ6ZQY2 392 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 CCDC80Q76M96 950 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 ERMP1Q7Z2K6 904 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 GALNT10Q86SR1 603 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 RPS19BP1Q86WX3 136 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 METTL25Q8N6Q8 603 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 BRIX1Q8TDN6 353 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 TMBIM1Q969X1 311 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 HSPBAP1Q96EW2 488 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 RMND5BQ96G75 393 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 THOC3Q96J01 351 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 TREX2Q9BQ50 279 aaPredicted RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 ZNF350Q9GZX5 532 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SAP130Q9H0E3 1048 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SLC38A1Q9H2H9 487 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 CDCP1Q9H5V8 836 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 BCL2L10Q9HD36 194 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 RYDENQ9NUL5 291 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 P2RX2Q9UBL9 471 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SUCOQ9UBS9 1254 aaKnown RBP6.91□□□□□ -1.3
UBR3-205ENST00000439681 POMPQ9Y244 141 aa6.91□□□□□ -1.3
UBR3-205ENST00000439681 SCN2AQ99250 2005 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 TMEM229AB2RXF0 380 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 CXCR6O00574 342 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 ARPC2O15144 300 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 TSPAN2O60636 221 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 OR2J2O76002 312 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 IL33O95760 270 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 AK1P00568 194 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 ITPKBP27987 946 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 ABCD3P28288 659 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 KDELR2P33947 212 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 TRAP1Q12931 704 aaKnown RBP6.9□□□□□ -1.3
UBR3-205ENST00000439681 BNIP2Q12982 314 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBR3-205ENST00000439681 DEFB109BQ30KR1 87 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 GPAT3Q53EU6 434 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 PRAMEF8Q5VWM4 474 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 PRAMEF7Q5VXH5 474 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 B3GNTL1Q67FW5 361 aaPredicted RBP6.9□□□□□ -1.3
UBR3-205ENST00000439681 GLYATQ6IB77 296 aa6.9□□□□□ -1.3
UBR3-205ENST00000439681 DESI1Q6ICB0 168 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms