RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 GSTK1Q9Y2Q3 226 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 GPR52Q9Y2T5 361 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 DNMT3AQ9Y6K1 912 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 HEATR5BQ9P2D3 2071 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 A0A0B4J293 547 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 TRDV1A0A1B0GX56 115 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 A6NL46 340 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 FAM170BA6NMN3 283 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SCO2O43819 266 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 HLA-DQB1P01920 261 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 HMGN2P05204 90 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SERPIND1P05546 499 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 FHP07954 510 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC35G4P0C7Q5 338 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 MYL9P24844 172 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 IFNGR2P38484 337 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 CD79BP40259 229 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 P2RY2P41231 377 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 MLLT3P42568 568 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 IL12RB1P42701 662 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 PRKAG1P54619 331 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 PPP3R1P63098 170 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 DAB2P98082 770 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 HTR4Q13639 388 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 ZIC1Q15915 447 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 TMEM35AQ53FP2 167 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 BHLHB9Q6PI77 547 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 RASSF6Q6ZTQ3 369 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 GALNT12Q8IXK2 581 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SIMC1Q8NDZ2 872 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SUSD6Q92537 303 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 RNF31Q96EP0 1072 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC38A2Q96QD8 506 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SOSTQ9BQB4 213 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 LGR4Q9BXB1 951 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 RNF121Q9H920 327 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 CD207Q9UJ71 328 aa15.38■□□□□ 0.05
CLCNKA-203ENST00000439316 SMIM30A4D0T7 59 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 PCCBP05166 539 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 GAAP10253 952 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 PTGER1P34995 402 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 KIR2DL3P43628 341 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 CLCNKAP51800 687 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 TAS2R41P59536 307 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 DUSP2Q05923 314 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 UAP1L1Q3KQV9 507 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 GPAT3Q53EU6 434 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 PRICKLE2Q7Z3G6 844 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 ADCK2Q7Z695 626 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 CAMKK1Q8N5S9 505 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 POGLUT1Q8NBL1 392 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 TTLQ8NG68 377 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 OR56A1Q8NGH5 318 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 DIO2Q92813 273 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 MOAP1Q96BY2 351 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 FRMD6Q96NE9 622 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 PRRG3Q9BZD7 231 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 KLHL31Q9H511 634 aa15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 THAP10Q9P2Z0 257 aaPredicted RBP15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
CLCNKA-203ENST00000439316 TMEM265A0A087WTH1 108 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 GLOD5A6NK44 160 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 C4orf51C9J302 202 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 HCN1O60741 890 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 APODP05090 189 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC1A3P43003 542 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 HOXC5Q00444 222 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 PRDX1Q06830 199 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC9A5Q14940 896 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 TRAM2Q15035 370 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 LCN1P1Q5VSP4 162 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 MRM1Q6IN84 353 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 SHFQ7M4L6 423 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 GJD3Q8N144 294 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 ATP6V1C2Q8NEY4 427 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 CNRIP1Q96F85 164 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 TTYH2Q9BSA4 534 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 HDAC8Q9BY41 377 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 QRSL1Q9H0R6 528 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 NDRG2Q9UN36 371 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 ASB4Q9Y574 426 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 KCNE3Q9Y6H6 103 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 A0A1W2PR48 441 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 ANKRD34BA5PLL1 514 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 CENPBD1B2RD01 187 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 ERAL1O75616 437 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 SSTR4P31391 388 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 SOX18P35713 384 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 BCL6P41182 706 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 OMPP47874 163 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 MAP4K2Q12851 820 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 RAB42Q8N4Z0 105 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 ARIH2OSQ8N7S6 290 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 OR2A1Q8NGT9 310 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 RAB7BQ96AH8 199 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 C16orf58Q96GQ5 468 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 COQ7Q99807 217 aa15.36■□□□□ 0.05
CLCNKA-203ENST00000439316 PRR14Q9BWN1 585 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms