RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PPCSQ9HAB8 311 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 DDX18Q9NVP1 670 aaKnown RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 EDARQ9UNE0 448 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 POLR3HQ9Y535 204 aaPredicted RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 TEP1Q99973 2627 aaKnown RBP16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 MYO1GB0I1T2 1018 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 COPEO14579 308 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 RSL1D1O76021 490 aaKnown RBP16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 TCEA1P23193 301 aaKnown RBP16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 GRK2P25098 689 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 MC3RP41968 323 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 OR5M10Q6IEU7 315 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 TMEM107Q6UX40 140 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 C9orf106Q8NAJ2 232 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 FAM76AQ8TAV0 307 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 RMND5BQ96G75 393 aaPredicted RBP16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 ZFP3Q96NJ6 502 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 TM9SF2Q99805 663 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 TUBA1CQ9BQE3 449 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 MYNNQ9NPC7 610 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 PPP4R1LQ9P1A2 415 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 FBXL2Q9UKC9 423 aa16.77■□□□□ 0.28
AC004540.1-201ENST00000439120 F8P00451 2351 aa16.77■□□□□ 0.27
AC004540.1-201ENST00000439120 A0A087WV62 115 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 TUBAL3A6NHL2 446 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 A6NNC1 897 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 PLIN3O60664 434 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 IL18BPO95998 194 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 SHBGP04278 402 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 UROSP10746 265 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 CPA3P15088 417 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 TACR1P25103 407 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 CRHR1P34998 444 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 DNAJB13P59910 316 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 DECR1Q16698 335 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 FAM71E1Q6IPT2 247 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 NOXRED1Q6NXP6 359 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 POMZP3Q6PJE2 187 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 IKBIPQ70UQ0 350 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 TRIM46Q7Z4K8 759 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 EIF1ADQ8N9N8 165 aaKnown RBP16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 OR4N2Q8NGD1 307 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 ACBD3Q9H3P7 528 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 RASSF1Q9NS23 344 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 MID2Q9UJV3 735 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 MRTO4Q9UKD2 239 aaKnown RBP16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 RPH3AQ9Y2J0 694 aaPredicted RBP16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 WBP11Q9Y2W2 641 aaKnown RBP16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 KIAA1549Q9HCM3 1950 aa16.76■□□□□ 0.27
AC004540.1-201ENST00000439120 CLCA1A8K7I4 914 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 SCO2O43819 266 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 SEC22BO75396 215 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 DPP4P27487 766 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 EVI2BP34910 448 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 CPA2P48052 419 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 STARP49675 285 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 CLK3P49761 638 aaKnown RBP16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 GFRA1P56159 465 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 RIPPLY3P57055 190 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 CYP27C1Q4G0S4 372 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 LIPMQ5VYY2 423 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 CHMP1BQ7LBR1 199 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 SFXN3Q9BWM7 321 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 IQCGQ9H095 443 aaKnown RBP16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 Q9N2J8 555 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 SDHAF3Q9NRP4 125 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 OXSMQ9NWU1 459 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 TAS2R7Q9NYW3 318 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 C19orf53Q9UNZ5 99 aaPredicted RBP16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 MRPS18CQ9Y3D5 142 aaKnown RBP16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 DOCK7Q96N67 2140 aa16.75■□□□□ 0.27
AC004540.1-201ENST00000439120 SLC28A1O00337 649 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 RGS14O43566 566 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 CHEK2O96017 543 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 KRT4P19013 534 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 CHMP24386 653 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 RFX3P48380 749 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 LHX2P50458 406 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 IST1P53990 364 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 PSMD4P55036 377 aaKnown RBP16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 DSCR4P56555 118 aaPredicted RBP16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 SORDQ00796 357 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 PSG6Q00889 435 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 CLEC6AQ6EIG7 209 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 P4HA3Q7Z4N8 544 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 TDRPQ86YL5 185 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 GRAMD2AQ8IUY3 354 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 EPS8L3Q8TE67 593 aaKnown RBP16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 NINJ1Q92982 152 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 WNT2BQ93097 391 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 AMDHD1Q96NU7 426 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 RBM24Q9BX46 236 aaKnown RBP16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 GLIPR2Q9H4G4 154 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 CBLCQ9ULV8 474 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 FIS1Q9Y3D6 152 aa16.74■□□□□ 0.27
AC004540.1-201ENST00000439120 UPK1AO00322 258 aa16.73■□□□□ 0.27
AC004540.1-201ENST00000439120 PLOD2O00469 737 aa16.73■□□□□ 0.27
AC004540.1-201ENST00000439120 RCBTB2O95199 551 aa16.73■□□□□ 0.27
AC004540.1-201ENST00000439120 GPC1P35052 558 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms