RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 UPP1Q16831 310 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 HYAL4Q2M3T9 481 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 CBWD6Q4V339 395 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 CBWD3Q5JTY5 395 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 C6orf52Q5T4I8 152 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 C9orf66Q5T8R8 295 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 ITPRIPL1Q6GPH6 555 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 STRADAQ7RTN6 431 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 DZIP1Q86YF9 867 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 C17orf53Q8N3J3 647 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 TCEANCQ8N8B7 351 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 MOB3AQ96BX8 217 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM120BQ96EK7 910 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 MBOAT7Q96N66 472 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 LRRC3BQ96PB8 259 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 BARD1Q99728 777 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLF1Q9BQI6 1058 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 RBM24Q9BX46 236 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 TEKT3Q9BXF9 490 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 ZDHHC4Q9NPG8 344 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 CLEC5AQ9NY25 188 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 HACD3Q9P035 362 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 ADD3Q9UEY8 706 aaKnown RBP2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 IGSF9BQ9UPX0 1349 aa2.04□□□□□ -2.08
HMGB1P18-201ENST00000438801 ALMS1Q8TCU4 4167 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 PLECQ15149 4684 aaKnown RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SYNDIG1LA6NDD5 238 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 K7EQS6 105 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCL24O00175 119 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 INPP4BO15327 924 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CYTIPO60759 359 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SDC3O75056 442 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 LINGO3P0C6S8 592 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM200BP0CF97 657 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CCDC166P0CW27 439 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 ATP6V1B1P15313 513 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CALRP27797 417 aaKnown RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 ELK3P41970 407 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SRPXP78539 464 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CHAF1BQ13112 559 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CUL4AQ13619 759 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 PIGHQ14442 188 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SIX1Q15475 284 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CHRNA6Q15825 494 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SNAPC1Q16533 368 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 FILIP1LQ4L180 1135 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 LEMD1Q68G75 181 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 TMUB2Q71RG4 321 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SZRD1Q7Z422 152 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 FAM9BQ8IZU0 186 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 ARIH2OSQ8N7S6 290 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 AVL9Q8NBF6 648 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 OR4Q3Q8NH05 313 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 PPTC7Q8NI37 304 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 ATL1Q8WXF7 558 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 NSUN4Q96CB9 384 aaKnown RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SERINC2Q96SA4 455 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 NUDT16L1Q9BRJ7 211 aaKnown RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CHCHD6Q9BRQ6 235 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 NUDT9Q9BW91 350 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 TEX12Q9BXU0 123 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 MRPL1Q9BYD6 325 aaKnown RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 SLC39A8Q9C0K1 460 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 VCPKMTQ9H867 229 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 HPS4Q9NQG7 708 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 BLOC1S4Q9NUP1 217 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 PRMT7Q9NVM4 692 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CWC25Q9NXE8 425 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 CRNNQ9UBG3 495 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 VPS28Q9UK41 221 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 RNF150Q9ULK6 438 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 GINS2Q9Y248 185 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 TMEM5Q9Y2B1 443 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 TRPV2Q9Y5S1 764 aa2.03□□□□□ -2.08
HMGB1P18-201ENST00000438801 NUP210Q8TEM1 1887 aaPredicted RBP2.03□□□□□ -2.09
HMGB1P18-201ENST00000438801 DNAJC13O75165 2243 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A0G2JLM5 398 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A0U1RQV1 116 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CASTOR2A6NHX0 329 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 RPL37AP8A6NKH3 93 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 F8VVB4 439 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 F8VWA3 439 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 UBFD1O14562 309 aaKnown RBP2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 SNX3O60493 162 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 MTRF1O75570 445 aaKnown RBP2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 RPS6KA5O75582 802 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 REM1O75628 298 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 SAT1P21673 171 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 UGT1A3P35503 534 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CETN2P41208 172 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 TNFSF9P41273 254 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CA7P43166 264 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 LHX1P48742 406 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CCL11P51671 97 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 RIDAP52758 137 aaKnown RBP2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR1D5P58170 312 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 SP4Q02446 784 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 ACY1Q03154 408 aa2.02□□□□□ -2.09
HMGB1P18-201ENST00000438801 CALD1Q05682 793 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms