RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 B3GALT5Q9Y2C3 310 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMED7Q9Y3B3 224 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 NME7Q9Y5B8 376 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 STON1Q9Y6Q2 735 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMARCA2P51531 1590 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 MST1RQ04912 1400 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNED1Q8TER0 1413 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 NCOA3Q9Y6Q9 1424 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ROCK1Q13464 1354 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 MN1Q10571 1320 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CDHR2Q9BYE9 1310 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRAV24A0A0B4J272 114 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 MTMR11A4FU01 709 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLEC18AA5D8T8 446 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF840PA6NDX5 716 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 FRG2CA6NGY1 282 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 EIF4E1BA6NMX2 242 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 F8VVB4 439 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 F8VWA3 439 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 RNASEK-C17orf49H0YIS7 233 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 H0YJX3 145 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 MKRN2OSH3BPM6 223 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM189-UBE2V1I3L0A0 370 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SIVA1O15304 175 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 STX7O15400 261 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 B4GALT5O43286 388 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNAI2O43623 268 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRIAP1O43715 76 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMPRSS11DO60235 418 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CNOT3O75175 753 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SCGNO76038 276 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SCELO95171 688 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TTLL1O95922 423 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 IFNA14P01570 189 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 IFNA6P05013 189 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CD63P08962 238 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ATP1B2P14415 290 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACADSP16219 412 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TNNI1P19237 187 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 GATA3P23771 443 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TEAD1P28347 426 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TACR3P29371 465 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SSTR1P30872 391 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CDH5P33151 784 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 UGT1A5P35504 534 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CFHR2P36980 270 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 FEN1P39748 380 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ID1P41134 155 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPL21P46778 160 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 RGRP47804 291 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 GNG10P50151 68 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF84P51523 738 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCR8P51685 355 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 NR0B1P51843 470 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLP1P60201 277 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ADARB1P78563 741 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 S100A12P80511 92 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SP3Q02447 781 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 GHRHRQ02643 423 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 TFF2Q03403 129 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 IL10RBQ08334 325 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 IFFO1Q0D2I5 559 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMARCB1Q12824 385 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CDC20Q12834 499 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ITGADQ13349 1161 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 UBE2V1Q13404 147 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PEX6Q13608 980 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CRMP1Q14194 572 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PTPRRQ15256 657 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SF3B4Q15427 424 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM189A2Q15884 450 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 GOLGA7BQ2TAP0 167 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLK5Q496M5 336 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 GGTA1PQ4G0N0 100 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 Q4G0T1 1027 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SYTL3Q4VX76 610 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTBL2Q562R1 376 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF691Q5VV52 312 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 NCAPH2Q6IBW4 605 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ADNP2Q6IQ32 1131 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC8B1Q6J4K2 584 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 METTL2BQ6P1Q9 378 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 DUS1LQ6P1R4 473 aaKnown RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLEC18BQ6UXF7 455 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF841Q6ZN19 808 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLEKHG7Q6ZR37 379 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 RTL4Q6ZR62 310 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 DPY19L4Q7Z388 723 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 MAVSQ7Z434 540 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLNKQ7Z7G1 428 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 DTX2Q86UW9 622 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF34Q8IZ26 560 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 RBFAQ8N0V3 343 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 PELI3Q8N2H9 469 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF786Q8N393 782 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 FGFRL1Q8N441 504 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLEC18CQ8NCF0 446 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 B3GALNT2Q8NCR0 500 aa3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 CHDHQ8NE62 594 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR13C3Q8NGS6 347 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms