RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 PPIAP62937 165 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 MRPS6P82932 125 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZP4Q12836 540 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 PEX6Q13608 980 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TRIP10Q15642 601 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 CD226Q15762 336 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 USH1GQ495M9 461 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TAF3Q5VWG9 929 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 DMKNQ6E0U4 476 aaPredicted RBP2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 SULT1C3Q6IMI6 304 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ATRAIDQ6UW56 229 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 BAIAP2L2Q6UXY1 529 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF562Q6V9R5 426 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 SERINC5Q86VE9 423 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 VPS36Q86VN1 386 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF573Q86YE8 665 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 HPS6Q86YV9 775 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 HIPK1Q86Z02 1210 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 SPAG16Q8N0X2 631 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ARL14Q8N4G2 192 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF671Q8TAW3 534 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 PINX1Q96BK5 328 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TSGA13Q96PP4 275 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 FAM173AQ9BQD7 235 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TSPY26PQ9H489 355 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 PALMDQ9NP74 551 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 TRPV5Q9NQA5 729 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 CENPMQ9NSP4 180 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 DCAF13Q9NV06 445 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF446Q9NWS9 450 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 C1orf123Q9NWV4 160 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 KLRF1Q9NZS2 232 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 CGNQ9P2M7 1197 aaKnown RBP2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 EPS15L1Q9UBC2 864 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 GHRLQ9UBU3 117 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 BLOC1S6Q9UL45 172 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 KIF3AQ9Y496 699 aa2.84□□□□□ -1.96
TRAPPC13-204ENST00000438419 AGRNO00468 2067 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 TRABD2BA6NFA1 517 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 MFSD2BA6NFX1 497 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF487B1APH4 448 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 E9PMD0 336 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 SGK494L7N484 410 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 E2F3O00716 465 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 NDC80O14777 642 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 ALOX15BO15296 676 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 OR4F21O95013 312 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 IGHG3P01860 377 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 TSPY4P0CV99 314 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 TSPY10P0CW01 314 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 KRT13P13646 458 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 ADRA1AP35348 466 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 HMGCLP35914 325 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 DLSTP36957 453 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 NAPAP54920 295 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 OVGP1Q12889 678 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 CRMP1Q14194 572 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 EIF2B1Q14232 305 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 C17orf58Q2M2W7 97 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 C14orf28Q4W4Y0 310 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 GALNT17Q6IS24 598 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 PRR5LQ6MZQ0 368 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 SLC39A4Q6P5W5 647 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 FAM43BQ6ZT52 329 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 NET1Q7Z628 596 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 EFCAB13Q8IY85 973 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 CCDC36Q8IYA8 594 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 GCNT2Q8N0V5 402 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 LINC00612Q8N6U2 182 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 DLX4Q92988 240 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 TADA1Q96BN2 335 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 SLC25A36Q96CQ1 311 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 NTNG2Q96CW9 530 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 HPDLQ96IR7 371 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 APOL2Q9BQE5 337 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 DUS2Q9NX74 493 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 TMOD2Q9NZR1 351 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 SENP1Q9P0U3 644 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 MBD2Q9UBB5 411 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 TP53TG3Q9ULZ0 132 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 MFHAS1Q9Y4C4 1052 aa2.83□□□□□ -1.96
TRAPPC13-204ENST00000438419 PARD3Q8TEW0 1356 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 A0A1B0GUL7 405 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 RNF222A6NCQ9 220 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 WASH3PC4AMC7 463 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 NPIPA2E9PIF3 369 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 C11orf98E9PRG8 122 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 CASKO14936 926 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 TOXO94900 526 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 MBD3O95983 291 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 SNRPCP09234 159 aaKnown RBP2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 THRBP10828 461 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 DPP4P27487 766 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 AXLP30530 894 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 KIF5BP33176 963 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 CYLC1P35663 651 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 ACAA2P42765 397 aaKnown RBP2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 POU3F4P49335 361 aa2.82□□□□□ -1.96
TRAPPC13-204ENST00000438419 ARHGDIAP52565 204 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms