RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HSD3B1P14060 373 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 CPN1P15169 458 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 PCSK2P16519 638 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 DRD5P21918 477 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TCEA1P23193 301 aaKnown RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 CHMP24386 653 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 HSD3B2P26439 372 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 PPICP45877 212 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 NAGLUP54802 743 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TRA2BP62995 288 aaKnown RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 ACSM2AQ08AH3 577 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 MAP4K2Q12851 820 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ZNF155Q12901 538 aaPredicted RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 FOXD4Q12950 439 aaPredicted RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 GAB1Q13480 694 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 RASA2Q15283 850 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 POU4F3Q15319 338 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TRADDQ15628 312 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 PRICKLE4Q2TBC4 344 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 DEFB113Q30KQ7 82 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 DCST1Q5T197 706 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 FNDC7Q5VTL7 733 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ACSM2BQ68CK6 577 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 FAM111BQ6SJ93 734 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 GPRIN3Q6ZVF9 776 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 LARP4Q71RC2 724 aaKnown RBP eCLIP7.06□□□□□ -1.28
VPS50-204ENST00000438395 PLCZ1Q86YW0 608 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TRIM42Q8IWZ5 723 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 GCNT2Q8N0V5 402 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 CDYL2Q8N8U2 506 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 MNS1Q8NEH6 495 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 CDC26Q8NHZ8 85 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 LINC01560Q8TB33 94 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ZPLD1Q8TCW7 415 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 SLC44A1Q8WWI5 657 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TMBIM1Q969X1 311 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ISL2Q96A47 359 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 INTS12Q96CB8 462 aaKnown RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 NTNG2Q96CW9 530 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ERP27Q96DN0 273 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 MBD6Q96DN6 1003 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 WDYHV1Q96HA8 205 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 GPR78Q96P69 363 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 BBS4Q96RK4 519 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 HBEGFQ99075 208 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 PAFAH2Q99487 392 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 FMO2Q99518 471 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TUBA1CQ9BQE3 449 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 OR2B2Q9GZK3 357 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 RASSF4Q9H2L5 321 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 LIME1Q9H400 295 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 GALNT8Q9NY28 637 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 VPS29Q9UBQ0 182 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 FETUBQ9UGM5 382 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TRPS1Q9UHF7 1281 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 PACSIN3Q9UKS6 424 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 EXO1Q9UQ84 846 aaKnown RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 DTX4Q9Y2E6 619 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 A0A087WUV0 522 aaPredicted RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 EXOC1LA0A1B0GW35 172 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 HMX2A2RU54 273 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 OR6C70A6NIJ9 312 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 A8MT66 165 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 KDM4EB2RXH2 506 aaPredicted RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 LINC01387J3KSC0 135 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 MANBAO00462 879 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 PCDH7O60245 1069 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 COQ9O75208 318 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 UGT2B11O75310 529 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ULK1O75385 1050 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 CRCPO75575 148 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 SUPT7LO94864 414 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 CBX7O95931 251 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 PDYNP01213 254 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 IL3P08700 152 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 RPS17P08708 135 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 FOSL1P15407 271 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 TSPAN8P19075 237 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 GRK2P25098 689 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 DPP4P27487 766 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ADSLP30566 484 aaPredicted RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 SRD5A2P31213 254 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 CLK3P49761 638 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 CDH13P55290 713 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 MRPS35P82673 323 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 GALNT1Q10472 559 aaPredicted RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 CSTF3Q12996 717 aaKnown RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 HEPACAMQ14CZ8 416 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ZNHIT3Q15649 155 aaPredicted RBP7.05□□□□□ -1.28
VPS50-204ENST00000438395 LTB4RQ15722 352 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 WHAMMP3Q1A5X7 153 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 SPIN4Q56A73 249 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 SH2D4BQ5SQS7 431 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 RAET1LQ5VY80 246 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 OR2A2Q6IF42 318 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 LETMD1Q6P1Q0 360 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 TMEM81Q6P7N7 255 aa7.05□□□□□ -1.28
VPS50-204ENST00000438395 ZNF572Q7Z3I7 529 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms